Strain Fitness in Escherichia coli BW25113 around b2075
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,152,447 | + | b2074 | b2074 | 0.33 | -1.1 |
2,152,677 | - | b2074 | b2074 | 0.51 | -0.4 |
2,152,677 | - | b2074 | b2074 | 0.51 | -2.2 |
2,152,748 | + | b2074 | b2074 | 0.57 | -1.0 |
2,152,748 | + | b2074 | b2074 | 0.57 | -0.3 |
2,153,105 | + | b2074 | b2074 | 0.85 | -2.2 |
2,153,105 | + | b2074 | b2074 | 0.85 | -0.8 |
2,153,113 | + | b2074 | b2074 | 0.86 | -2.2 |
2,153,113 | - | b2074 | b2074 | 0.86 | -1.2 |
2,153,113 | - | b2074 | b2074 | 0.86 | +1.2 |
2,153,115 | + | b2074 | b2074 | 0.86 | -1.4 |
2,153,343 | - | -0.3 | |||
2,153,359 | - | -0.6 | |||
2,153,359 | - | -2.2 | |||
2,153,415 | - | -1.6 | |||
2,153,471 | + | -1.0 | |||
2,153,581 | + | -1.6 | |||
2,153,581 | + | -1.4 | |||
2,153,695 | + | mdtB | b2075 | 0.13 | -1.2 |
2,153,695 | + | mdtB | b2075 | 0.13 | -1.6 |
2,153,753 | + | mdtB | b2075 | 0.15 | -2.5 |
2,153,753 | + | mdtB | b2075 | 0.15 | -0.4 |
2,153,984 | + | mdtB | b2075 | 0.22 | -0.7 |
2,154,025 | + | mdtB | b2075 | 0.24 | +0.2 |
2,154,086 | + | mdtB | b2075 | 0.26 | -3.0 |
2,154,103 | - | mdtB | b2075 | 0.26 | -0.2 |
2,154,231 | + | mdtB | b2075 | 0.30 | -2.2 |
2,154,240 | - | mdtB | b2075 | 0.31 | -0.8 |
2,154,260 | + | mdtB | b2075 | 0.31 | +0.2 |
2,154,260 | + | mdtB | b2075 | 0.31 | +0.2 |
2,154,419 | + | mdtB | b2075 | 0.36 | -2.1 |
2,154,583 | + | mdtB | b2075 | 0.41 | -1.6 |
2,154,606 | - | mdtB | b2075 | 0.42 | -0.3 |
2,154,606 | - | mdtB | b2075 | 0.42 | -0.7 |
2,154,663 | + | mdtB | b2075 | 0.44 | -0.4 |
2,154,709 | + | mdtB | b2075 | 0.46 | -1.8 |
2,154,863 | + | mdtB | b2075 | 0.50 | -0.6 |
2,154,926 | - | mdtB | b2075 | 0.52 | -1.8 |
2,155,098 | - | mdtB | b2075 | 0.58 | -0.2 |
2,155,135 | + | mdtB | b2075 | 0.59 | -2.3 |
2,155,143 | - | mdtB | b2075 | 0.59 | +0.0 |
2,155,143 | - | mdtB | b2075 | 0.59 | -1.2 |
2,155,213 | + | mdtB | b2075 | 0.62 | -1.4 |
2,155,213 | + | mdtB | b2075 | 0.62 | +1.2 |
2,155,357 | - | mdtB | b2075 | 0.66 | -3.0 |
2,155,480 | - | mdtB | b2075 | 0.70 | +0.4 |
2,155,514 | - | mdtB | b2075 | 0.71 | -0.2 |
2,155,543 | + | mdtB | b2075 | 0.72 | -1.5 |
2,155,550 | - | mdtB | b2075 | 0.72 | -0.8 |
2,155,566 | - | mdtB | b2075 | 0.73 | -1.6 |
2,155,594 | - | mdtB | b2075 | 0.74 | -0.6 |
2,155,630 | - | mdtB | b2075 | 0.75 | +0.5 |
2,155,630 | - | mdtB | b2075 | 0.75 | +1.2 |
2,155,761 | - | mdtB | b2075 | 0.79 | -2.7 |
2,155,885 | + | mdtB | b2075 | 0.83 | -1.2 |
2,155,919 | + | mdtB | b2075 | 0.84 | -0.6 |
2,156,112 | - | -1.6 | |||
2,156,167 | + | -1.5 | |||
2,156,248 | - | -0.2 | |||
2,156,265 | - | -1.0 | |||
2,156,330 | - | -0.3 | |||
2,156,357 | + | -2.2 | |||
2,156,478 | + | -1.1 | |||
2,156,511 | - | -0.4 | |||
2,156,564 | + | -0.4 | |||
2,156,564 | + | -2.0 | |||
2,156,991 | + | mdtC | b2076 | 0.19 | -2.6 |
2,157,092 | - | mdtC | b2076 | 0.22 | -0.4 |
2,157,092 | - | mdtC | b2076 | 0.22 | +0.2 |
2,157,158 | - | mdtC | b2076 | 0.24 | +0.4 |
2,157,214 | - | mdtC | b2076 | 0.26 | +0.2 |
2,157,272 | - | mdtC | b2076 | 0.28 | +0.8 |
2,157,330 | + | mdtC | b2076 | 0.30 | -2.4 |
2,157,378 | + | mdtC | b2076 | 0.31 | -0.4 |
Or see this region's nucleotide sequence