Strain Fitness in Escherichia coli BW25113 around b1928
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,004,739 | - | amyA | b1927 | 0.38 | +0.3 |
| 2,004,809 | + | amyA | b1927 | 0.42 | -0.8 |
| 2,004,861 | - | amyA | b1927 | 0.46 | +1.2 |
| 2,004,942 | - | amyA | b1927 | 0.51 | +0.3 |
| 2,005,017 | - | amyA | b1927 | 0.56 | -0.8 |
| 2,005,185 | + | amyA | b1927 | 0.68 | -1.4 |
| 2,005,185 | + | amyA | b1927 | 0.68 | -0.4 |
| 2,005,308 | + | amyA | b1927 | 0.76 | +0.2 |
| 2,005,308 | + | amyA | b1927 | 0.76 | +0.4 |
| 2,005,310 | + | amyA | b1927 | 0.76 | +0.2 |
| 2,005,410 | - | amyA | b1927 | 0.83 | +0.1 |
| 2,005,410 | - | amyA | b1927 | 0.83 | +0.8 |
| 2,005,443 | - | amyA | b1927 | 0.85 | -1.4 |
| 2,005,591 | - | -0.6 | |||
| 2,005,633 | + | -0.8 | |||
| 2,005,633 | + | +1.2 | |||
| 2,005,659 | - | +0.2 | |||
| 2,005,659 | - | -0.8 | |||
| 2,005,729 | + | -2.4 | |||
| 2,005,787 | - | yedD | b1928 | 0.21 | -1.4 |
| 2,005,788 | + | yedD | b1928 | 0.21 | -0.6 |
| 2,005,801 | - | yedD | b1928 | 0.24 | -0.4 |
| 2,005,801 | - | yedD | b1928 | 0.24 | -0.8 |
| 2,005,809 | - | yedD | b1928 | 0.26 | -2.4 |
| 2,005,827 | - | yedD | b1928 | 0.30 | -1.4 |
| 2,005,953 | + | yedD | b1928 | 0.61 | -1.2 |
| 2,005,969 | - | yedD | b1928 | 0.65 | -0.7 |
| 2,006,256 | - | -0.4 | |||
| 2,006,284 | + | +0.4 | |||
| 2,006,393 | - | +0.4 | |||
| 2,006,393 | - | -0.2 | |||
| 2,006,417 | + | +0.1 | |||
| 2,006,417 | + | -0.6 | |||
| 2,006,457 | - | yedE | b1929 | 0.13 | -0.9 |
| 2,006,508 | + | yedE | b1929 | 0.17 | -0.4 |
| 2,006,605 | - | yedE | b1929 | 0.25 | -0.8 |
| 2,006,732 | - | yedE | b1929 | 0.36 | -0.3 |
| 2,006,767 | - | yedE | b1929 | 0.39 | +1.6 |
| 2,006,772 | - | yedE | b1929 | 0.39 | -0.4 |
| 2,006,951 | - | yedE | b1929 | 0.54 | +1.2 |
| 2,006,989 | + | yedE | b1929 | 0.57 | +1.7 |
| 2,007,062 | + | yedE | b1929 | 0.63 | +0.5 |
| 2,007,062 | + | yedE | b1929 | 0.63 | +0.5 |
Or see this region's nucleotide sequence