Strain Fitness in Escherichia coli BW25113 around b1908
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,988,066 | - | tyrP | b1907 | 0.30 | -0.8 |
1,988,183 | + | tyrP | b1907 | 0.39 | -0.9 |
1,988,309 | - | tyrP | b1907 | 0.50 | +1.0 |
1,988,344 | - | tyrP | b1907 | 0.53 | +0.3 |
1,988,420 | + | tyrP | b1907 | 0.59 | -0.8 |
1,988,420 | + | tyrP | b1907 | 0.59 | +1.2 |
1,988,478 | + | tyrP | b1907 | 0.64 | +0.8 |
1,988,706 | - | tyrP | b1907 | 0.83 | +1.0 |
1,988,860 | + | +0.5 | |||
1,988,898 | + | -0.1 | |||
1,988,957 | - | -1.2 | |||
1,989,096 | + | yecA | b1908 | 0.18 | +0.2 |
1,989,154 | - | yecA | b1908 | 0.26 | +0.1 |
1,989,198 | + | yecA | b1908 | 0.33 | +0.0 |
1,989,216 | - | yecA | b1908 | 0.36 | -0.8 |
1,989,216 | - | yecA | b1908 | 0.36 | -1.0 |
1,989,265 | + | yecA | b1908 | 0.43 | -0.6 |
1,989,348 | + | yecA | b1908 | 0.56 | +0.5 |
1,989,348 | + | yecA | b1908 | 0.56 | +0.2 |
1,989,454 | + | yecA | b1908 | 0.71 | +0.2 |
Or see this region's nucleotide sequence