Strain Fitness in Escherichia coli BW25113 around b1835
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,917,326 | - | yebT | b1834 | 0.68 | +2.6 |
1,917,326 | - | yebT | b1834 | 0.68 | +0.5 |
1,917,618 | + | yebT | b1834 | 0.79 | +0.2 |
1,917,625 | + | yebT | b1834 | 0.79 | +1.0 |
1,917,757 | - | yebT | b1834 | 0.84 | +1.5 |
1,917,757 | - | yebT | b1834 | 0.84 | +0.7 |
1,917,829 | + | yebT | b1834 | 0.87 | +1.3 |
1,917,829 | + | yebT | b1834 | 0.87 | +2.1 |
1,917,884 | + | yebT | b1834 | 0.89 | +0.9 |
1,917,937 | + | +0.6 | |||
1,917,984 | - | +3.1 | |||
1,918,087 | + | +2.7 | |||
1,918,174 | + | +1.0 | |||
1,918,237 | + | -0.5 | |||
1,918,316 | - | -0.4 | |||
1,918,509 | + | yebU | b1835 | 0.18 | -3.6 |
1,918,509 | + | yebU | b1835 | 0.18 | -0.4 |
1,919,038 | - | yebU | b1835 | 0.55 | +0.4 |
1,919,085 | - | yebU | b1835 | 0.58 | -1.2 |
1,919,085 | - | yebU | b1835 | 0.58 | -0.4 |
1,919,333 | + | yebU | b1835 | 0.75 | +0.4 |
1,919,580 | - | +0.8 | |||
1,919,818 | + | +0.6 | |||
1,919,871 | + | yebV | b1836 | 0.28 | +0.7 |
1,919,929 | + | yebV | b1836 | 0.53 | +1.2 |
1,919,929 | + | yebV | b1836 | 0.53 | -1.3 |
1,920,220 | + | yebW | b1837 | 0.39 | -0.2 |
1,920,220 | + | yebW | b1837 | 0.39 | -0.9 |
1,920,256 | - | yebW | b1837 | 0.58 | +1.1 |
1,920,256 | - | yebW | b1837 | 0.58 | -2.2 |
1,920,373 | - | -0.2 | |||
1,920,389 | + | -1.0 | |||
1,920,429 | + | pphA | b1838 | 0.14 | +0.3 |
1,920,448 | - | pphA | b1838 | 0.17 | +0.6 |
1,920,474 | + | pphA | b1838 | 0.21 | +0.3 |
1,920,510 | - | pphA | b1838 | 0.26 | -0.3 |
1,920,510 | - | pphA | b1838 | 0.26 | +1.1 |
Or see this region's nucleotide sequence