Strain Fitness in Escherichia coli BW25113 around b1630
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,706,363 | + | rsxC | b1629 | 0.64 | +1.1 |
1,706,547 | - | rsxC | b1629 | 0.72 | +0.5 |
1,706,829 | + | rsxC | b1629 | 0.85 | -0.3 |
1,706,859 | + | rsxC | b1629 | 0.86 | +0.7 |
1,706,859 | + | rsxC | b1629 | 0.86 | -1.4 |
1,706,883 | - | rsxC | b1629 | 0.87 | -1.0 |
1,706,883 | - | rsxC | b1629 | 0.87 | +1.1 |
1,706,924 | + | rsxC | b1629 | 0.89 | +0.7 |
1,707,252 | + | +1.1 | |||
1,707,252 | + | -0.9 | |||
1,707,328 | + | rsxD | b1630 | 0.15 | -1.3 |
1,707,414 | + | rsxD | b1630 | 0.23 | +1.6 |
1,707,414 | + | rsxD | b1630 | 0.23 | +0.4 |
1,707,473 | - | rsxD | b1630 | 0.29 | -0.5 |
1,707,579 | - | rsxD | b1630 | 0.39 | -1.4 |
1,707,696 | - | rsxD | b1630 | 0.50 | +0.1 |
1,707,716 | + | rsxD | b1630 | 0.52 | +0.2 |
1,707,793 | + | rsxD | b1630 | 0.59 | -0.2 |
1,707,803 | - | rsxD | b1630 | 0.60 | -0.8 |
1,707,895 | + | rsxD | b1630 | 0.69 | -0.4 |
1,707,914 | - | rsxD | b1630 | 0.71 | -0.5 |
1,707,924 | + | rsxD | b1630 | 0.72 | +0.3 |
1,708,021 | + | rsxD | b1630 | 0.81 | +0.1 |
1,708,161 | + | +0.1 | |||
1,708,161 | + | -0.4 | |||
1,708,187 | - | -0.8 | |||
1,708,227 | - | -0.5 | |||
1,708,253 | + | +1.9 | |||
1,708,253 | + | +1.1 | |||
1,708,996 | - | rsxE | b1632 | 0.21 | -0.3 |
1,709,004 | + | rsxE | b1632 | 0.22 | +0.3 |
1,709,034 | - | rsxE | b1632 | 0.26 | -0.5 |
1,709,096 | + | rsxE | b1632 | 0.35 | -0.9 |
1,709,096 | + | rsxE | b1632 | 0.35 | +0.2 |
1,709,106 | - | rsxE | b1632 | 0.36 | +0.4 |
1,709,123 | + | rsxE | b1632 | 0.39 | -0.6 |
1,709,128 | + | rsxE | b1632 | 0.40 | +0.5 |
1,709,182 | + | rsxE | b1632 | 0.47 | -0.5 |
Or see this region's nucleotide sequence