Strain Fitness in Escherichia coli BW25113 around b1424
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,494,003 | + | ydcJ | b1423 | 0.51 | +0.3 |
1,494,636 | - | +0.5 | |||
1,494,920 | - | +2.5 | |||
1,494,927 | + | +3.0 | |||
1,495,046 | + | mdoD | b1424 | 0.10 | +2.9 |
1,495,047 | - | mdoD | b1424 | 0.10 | +2.9 |
1,495,050 | + | mdoD | b1424 | 0.10 | +3.1 |
1,495,050 | + | mdoD | b1424 | 0.10 | +4.3 |
1,495,117 | + | mdoD | b1424 | 0.14 | +0.5 |
1,495,117 | + | mdoD | b1424 | 0.14 | +2.9 |
1,495,129 | + | mdoD | b1424 | 0.15 | +3.8 |
1,495,129 | + | mdoD | b1424 | 0.15 | +3.8 |
1,495,447 | + | mdoD | b1424 | 0.34 | +2.9 |
1,495,518 | + | mdoD | b1424 | 0.39 | +3.5 |
1,495,518 | + | mdoD | b1424 | 0.39 | +3.8 |
1,495,604 | - | mdoD | b1424 | 0.44 | +2.5 |
1,495,604 | - | mdoD | b1424 | 0.44 | +4.1 |
1,495,719 | + | mdoD | b1424 | 0.51 | +2.7 |
1,495,895 | - | mdoD | b1424 | 0.61 | +0.1 |
1,496,356 | - | mdoD | b1424 | 0.89 | +3.6 |
1,496,356 | - | mdoD | b1424 | 0.89 | +2.9 |
1,496,405 | + | +1.9 | |||
1,496,405 | + | +3.7 | |||
1,496,405 | + | +4.1 | |||
1,496,413 | - | +2.8 | |||
1,496,413 | - | +2.5 | |||
1,496,413 | - | +2.1 | |||
1,496,669 | - | +1.4 | |||
1,496,669 | - | -0.3 | |||
1,496,673 | - | -1.5 | |||
1,496,808 | - | ydcH | b1426 | 0.59 | +0.9 |
1,496,896 | - | -1.8 | |||
1,497,142 | - | rimL | b1427 | 0.33 | +0.5 |
1,497,231 | + | rimL | b1427 | 0.50 | +1.1 |
1,497,266 | + | rimL | b1427 | 0.56 | -1.1 |
1,497,328 | - | rimL | b1427 | 0.68 | +1.1 |
1,497,407 | + | rimL | b1427 | 0.82 | +0.3 |
Or see this region's nucleotide sequence