Strain Fitness in Escherichia coli BW25113 around b1423
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,492,510 | + | ydcI | b1422 | 0.37 | +0.5 |
1,492,510 | + | ydcI | b1422 | 0.37 | -0.3 |
1,492,540 | + | ydcI | b1422 | 0.40 | +1.3 |
1,492,602 | + | ydcI | b1422 | 0.47 | -0.3 |
1,492,771 | + | ydcI | b1422 | 0.65 | -0.2 |
1,492,857 | - | ydcI | b1422 | 0.74 | -0.7 |
1,492,857 | - | ydcI | b1422 | 0.74 | -1.5 |
1,492,914 | - | ydcI | b1422 | 0.80 | -0.3 |
1,492,953 | - | ydcI | b1422 | 0.85 | +0.1 |
1,492,970 | - | ydcI | b1422 | 0.86 | -1.0 |
1,492,970 | - | ydcI | b1422 | 0.86 | +0.2 |
1,493,290 | - | +1.1 | |||
1,493,433 | - | +0.8 | |||
1,493,545 | - | ydcJ | b1423 | 0.17 | +0.6 |
1,493,581 | - | ydcJ | b1423 | 0.20 | +2.0 |
1,493,704 | - | ydcJ | b1423 | 0.29 | -2.5 |
1,494,003 | + | ydcJ | b1423 | 0.51 | +0.3 |
1,494,636 | - | +0.5 | |||
1,494,920 | - | +2.5 | |||
1,494,927 | + | +3.0 | |||
1,495,046 | + | mdoD | b1424 | 0.10 | +2.9 |
1,495,047 | - | mdoD | b1424 | 0.10 | +2.9 |
1,495,050 | + | mdoD | b1424 | 0.10 | +3.1 |
1,495,050 | + | mdoD | b1424 | 0.10 | +4.3 |
1,495,117 | + | mdoD | b1424 | 0.14 | +0.5 |
1,495,117 | + | mdoD | b1424 | 0.14 | +2.9 |
1,495,129 | + | mdoD | b1424 | 0.15 | +3.8 |
1,495,129 | + | mdoD | b1424 | 0.15 | +3.8 |
1,495,447 | + | mdoD | b1424 | 0.34 | +2.9 |
1,495,518 | + | mdoD | b1424 | 0.39 | +3.5 |
1,495,518 | + | mdoD | b1424 | 0.39 | +3.8 |
1,495,604 | - | mdoD | b1424 | 0.44 | +2.5 |
1,495,604 | - | mdoD | b1424 | 0.44 | +4.1 |
Or see this region's nucleotide sequence