Strain Fitness in Escherichia coli BW25113 around b1219
Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Bacitracin 1 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,271,475 | - | chaB | b1217 | 0.58 | +1.5 |
| 1,271,723 | + | +0.1 | |||
| 1,271,892 | + | chaC | b1218 | 0.23 | +0.1 |
| 1,271,892 | + | chaC | b1218 | 0.23 | -1.4 |
| 1,271,932 | - | chaC | b1218 | 0.29 | -0.4 |
| 1,272,143 | - | chaC | b1218 | 0.59 | +0.5 |
| 1,272,159 | - | chaC | b1218 | 0.62 | -0.9 |
| 1,272,288 | - | chaC | b1218 | 0.80 | -0.6 |
| 1,272,522 | - | ychN | b1219 | 0.15 | -1.4 |
| 1,272,532 | - | ychN | b1219 | 0.18 | -1.0 |
| 1,272,581 | - | ychN | b1219 | 0.32 | -0.3 |
| 1,272,615 | - | ychN | b1219 | 0.41 | +1.1 |
| 1,272,714 | + | ychN | b1219 | 0.69 | -2.7 |
| 1,272,787 | - | -0.9 | |||
| 1,272,787 | - | -0.3 | |||
| 1,273,039 | + | +2.9 | |||
| 1,273,305 | + | ychO | b1220 | 0.21 | +1.6 |
| 1,273,328 | - | ychO | b1220 | 0.23 | +2.5 |
| 1,273,328 | - | ychO | b1220 | 0.23 | +2.6 |
| 1,273,463 | + | ychO | b1220 | 0.33 | +2.0 |
| 1,273,493 | + | ychO | b1220 | 0.35 | +1.5 |
| 1,273,732 | + | ychO | b1220 | 0.52 | +2.3 |
| 1,273,737 | + | ychO | b1220 | 0.52 | +1.8 |
Or see this region's nucleotide sequence