Experiment: Bacitracin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt artJ and artM are separated by 290 nucleotides artM and artQ overlap by 1 nucleotides artQ and artI are separated by 6 nucleotides
b0860: artJ - arginine transporter subunit (NCBI), at 899,067 to 899,798
artJ
b0861: artM - arginine transporter subunit (NCBI), at 900,089 to 900,757
artM
b0862: artQ - arginine transporter subunit (NCBI), at 900,757 to 901,473
artQ
b0863: artI - arginine transporter subunit (NCBI), at 901,480 to 902,211
artI
Position (kb)
900
901 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 899.181 kb on + strand, within artJ at 899.189 kb on - strand, within artJ at 899.189 kb on - strand, within artJ at 899.335 kb on + strand, within artJ at 899.487 kb on - strand, within artJ at 899.497 kb on + strand, within artJ at 899.497 kb on + strand, within artJ at 899.515 kb on - strand, within artJ at 899.520 kb on - strand, within artJ at 899.522 kb on + strand, within artJ at 899.522 kb on + strand, within artJ at 899.684 kb on + strand, within artJ at 899.846 kb on - strand at 900.015 kb on + strand at 900.140 kb on - strand at 900.140 kb on - strand at 900.193 kb on + strand, within artM at 900.258 kb on - strand, within artM at 900.266 kb on - strand, within artM at 900.270 kb on - strand, within artM at 900.330 kb on - strand, within artM at 900.330 kb on - strand, within artM at 900.445 kb on + strand, within artM at 900.596 kb on - strand, within artM at 900.596 kb on - strand, within artM at 900.611 kb on - strand, within artM at 900.611 kb on - strand, within artM at 900.706 kb on + strand at 900.873 kb on + strand, within artQ at 901.049 kb on + strand, within artQ at 901.059 kb on + strand, within artQ at 901.088 kb on + strand, within artQ at 901.191 kb on + strand, within artQ at 901.191 kb on + strand, within artQ at 901.555 kb on - strand, within artI at 901.590 kb on - strand, within artI at 901.590 kb on - strand, within artI at 901.669 kb on - strand, within artI at 901.669 kb on - strand, within artI
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 1 mg/ml remove 899,181 + artJ b0860 0.16 +0.6 899,189 - artJ b0860 0.17 -0.3 899,189 - artJ b0860 0.17 +1.7 899,335 + artJ b0860 0.37 +2.2 899,487 - artJ b0860 0.57 +1.1 899,497 + artJ b0860 0.59 +0.4 899,497 + artJ b0860 0.59 +0.7 899,515 - artJ b0860 0.61 +0.2 899,520 - artJ b0860 0.62 -0.6 899,522 + artJ b0860 0.62 +1.7 899,522 + artJ b0860 0.62 -0.8 899,684 + artJ b0860 0.84 +0.7 899,846 - +1.2 900,015 + -1.1 900,140 - +1.2 900,140 - +0.8 900,193 + artM b0861 0.16 +0.7 900,258 - artM b0861 0.25 +1.0 900,266 - artM b0861 0.26 -1.9 900,270 - artM b0861 0.27 +2.6 900,330 - artM b0861 0.36 +1.3 900,330 - artM b0861 0.36 -1.1 900,445 + artM b0861 0.53 -0.3 900,596 - artM b0861 0.76 +0.7 900,596 - artM b0861 0.76 +0.5 900,611 - artM b0861 0.78 -0.3 900,611 - artM b0861 0.78 +2.0 900,706 + -1.3 900,873 + artQ b0862 0.16 +0.5 901,049 + artQ b0862 0.41 -1.1 901,059 + artQ b0862 0.42 -0.1 901,088 + artQ b0862 0.46 -0.8 901,191 + artQ b0862 0.61 -0.8 901,191 + artQ b0862 0.61 -0.8 901,555 - artI b0863 0.10 +0.4 901,590 - artI b0863 0.15 +1.2 901,590 - artI b0863 0.15 -1.6 901,669 - artI b0863 0.26 -0.2 901,669 - artI b0863 0.26 +0.9
Or see this region's nucleotide sequence