Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_794 and PfGW456L13_795 are separated by 24 nucleotides PfGW456L13_795 and PfGW456L13_796 are separated by 101 nucleotides PfGW456L13_796 and PfGW456L13_797 are separated by 5 nucleotides PfGW456L13_797 and PfGW456L13_798 are separated by 135 nucleotides PfGW456L13_798 and PfGW456L13_799 are separated by 124 nucleotides
PfGW456L13_794 - Phosphomannomutase (EC 5.4.2.8) / Phosphoglucomutase (EC 5.4.2.2), at 894,959 to 896,356
_794
PfGW456L13_795 - hypothetical protein, at 896,381 to 896,500
_795
PfGW456L13_796 - Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC 3.6.1.23), at 896,602 to 897,057
_796
PfGW456L13_797 - Phosphopantothenoylcysteine decarboxylase (EC 4.1.1.36) / Phosphopantothenoylcysteine synthetase (EC 6.3.2.5), at 897,063 to 898,271
_797
PfGW456L13_798 - DNA repair protein RadC, at 898,407 to 899,081
_798
PfGW456L13_799 - Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2), at 899,206 to 900,792
_799
Position (kb)
897
898
899 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 896.063 kb on + strand, within PfGW456L13_794 at 896.064 kb on - strand, within PfGW456L13_794 at 896.064 kb on - strand, within PfGW456L13_794 at 896.064 kb on - strand, within PfGW456L13_794 at 896.076 kb on + strand, within PfGW456L13_794 at 896.076 kb on + strand, within PfGW456L13_794 at 896.077 kb on - strand, within PfGW456L13_794 at 896.077 kb on - strand, within PfGW456L13_794 at 896.077 kb on - strand, within PfGW456L13_794 at 896.077 kb on - strand, within PfGW456L13_794 at 896.077 kb on - strand, within PfGW456L13_794 at 896.079 kb on + strand, within PfGW456L13_794 at 896.079 kb on + strand, within PfGW456L13_794 at 896.080 kb on - strand, within PfGW456L13_794 at 896.080 kb on - strand, within PfGW456L13_794 at 896.080 kb on - strand, within PfGW456L13_794 at 896.080 kb on - strand, within PfGW456L13_794 at 896.431 kb on + strand, within PfGW456L13_795 at 896.432 kb on - strand, within PfGW456L13_795 at 896.527 kb on + strand at 896.527 kb on + strand at 896.527 kb on + strand at 896.528 kb on - strand at 897.065 kb on - strand at 897.065 kb on - strand at 898.300 kb on + strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.301 kb on - strand at 898.353 kb on - strand at 898.353 kb on - strand at 898.353 kb on - strand at 898.353 kb on - strand at 898.358 kb on - strand at 898.406 kb on + strand at 898.406 kb on + strand at 898.406 kb on + strand at 898.406 kb on + strand at 898.406 kb on + strand at 898.407 kb on - strand at 898.407 kb on - strand at 898.407 kb on - strand at 898.407 kb on - strand at 898.407 kb on - strand at 898.407 kb on - strand at 898.407 kb on - strand at 898.407 kb on - strand at 898.407 kb on - strand at 898.407 kb on - strand at 898.412 kb on + strand at 898.412 kb on + strand at 898.412 kb on + strand at 898.413 kb on - strand at 898.413 kb on - strand at 898.413 kb on - strand at 898.413 kb on - strand at 898.413 kb on - strand at 898.507 kb on + strand, within PfGW456L13_798 at 898.527 kb on - strand, within PfGW456L13_798 at 898.527 kb on - strand, within PfGW456L13_798 at 898.537 kb on + strand, within PfGW456L13_798 at 898.537 kb on + strand, within PfGW456L13_798 at 898.538 kb on - strand, within PfGW456L13_798 at 898.538 kb on - strand, within PfGW456L13_798 at 898.538 kb on - strand, within PfGW456L13_798 at 898.538 kb on - strand, within PfGW456L13_798 at 898.538 kb on - strand, within PfGW456L13_798 at 898.538 kb on - strand, within PfGW456L13_798 at 898.703 kb on + strand, within PfGW456L13_798 at 898.703 kb on + strand, within PfGW456L13_798 at 898.703 kb on + strand, within PfGW456L13_798 at 898.704 kb on - strand, within PfGW456L13_798 at 898.704 kb on - strand, within PfGW456L13_798 at 898.704 kb on - strand, within PfGW456L13_798 at 898.704 kb on - strand, within PfGW456L13_798 at 898.741 kb on - strand, within PfGW456L13_798 at 899.067 kb on + strand at 899.093 kb on + strand at 899.093 kb on + strand at 899.093 kb on + strand at 899.093 kb on + strand at 899.093 kb on + strand at 899.094 kb on - strand at 899.189 kb on + strand at 899.189 kb on + strand at 899.190 kb on - strand at 899.207 kb on + strand at 899.207 kb on + strand at 899.207 kb on + strand at 899.208 kb on - strand at 899.208 kb on - strand at 899.228 kb on + strand at 899.229 kb on - strand at 899.229 kb on - strand at 899.229 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 896,063 + PfGW456L13_794 0.79 +1.4 896,064 - PfGW456L13_794 0.79 +0.0 896,064 - PfGW456L13_794 0.79 -0.6 896,064 - PfGW456L13_794 0.79 +0.8 896,076 + PfGW456L13_794 0.80 -2.1 896,076 + PfGW456L13_794 0.80 +0.8 896,077 - PfGW456L13_794 0.80 -1.3 896,077 - PfGW456L13_794 0.80 -2.0 896,077 - PfGW456L13_794 0.80 +0.4 896,077 - PfGW456L13_794 0.80 +0.0 896,077 - PfGW456L13_794 0.80 -2.7 896,079 + PfGW456L13_794 0.80 +1.7 896,079 + PfGW456L13_794 0.80 -2.1 896,080 - PfGW456L13_794 0.80 -2.3 896,080 - PfGW456L13_794 0.80 -1.8 896,080 - PfGW456L13_794 0.80 -3.5 896,080 - PfGW456L13_794 0.80 -3.0 896,431 + PfGW456L13_795 0.42 -2.2 896,432 - PfGW456L13_795 0.42 -2.8 896,527 + -1.5 896,527 + -2.6 896,527 + -1.2 896,528 - +0.3 897,065 - +2.6 897,065 - -0.3 898,300 + -0.1 898,301 - +0.4 898,301 - -2.0 898,301 - +1.2 898,301 - -2.1 898,301 - +2.0 898,301 - -0.7 898,301 - +1.7 898,301 - +1.9 898,301 - +0.7 898,301 - +0.5 898,301 - -2.1 898,301 - -0.3 898,301 - +0.7 898,301 - +1.1 898,301 - +0.3 898,301 - -4.0 898,301 - -1.8 898,301 - -2.6 898,353 - -0.5 898,353 - -2.8 898,353 - -1.5 898,353 - +1.0 898,358 - +1.1 898,406 + -3.4 898,406 + +0.9 898,406 + +1.9 898,406 + -1.7 898,406 + +0.4 898,407 - -1.0 898,407 - -1.6 898,407 - +0.4 898,407 - -2.0 898,407 - +0.4 898,407 - +0.4 898,407 - -2.9 898,407 - -1.2 898,407 - -3.0 898,407 - +1.4 898,412 + +4.4 898,412 + +1.6 898,412 + +1.1 898,413 - -2.5 898,413 - -1.8 898,413 - +0.4 898,413 - -1.1 898,413 - -1.9 898,507 + PfGW456L13_798 0.15 +0.4 898,527 - PfGW456L13_798 0.18 -2.2 898,527 - PfGW456L13_798 0.18 +1.0 898,537 + PfGW456L13_798 0.19 -2.1 898,537 + PfGW456L13_798 0.19 -2.8 898,538 - PfGW456L13_798 0.19 +1.1 898,538 - PfGW456L13_798 0.19 -0.4 898,538 - PfGW456L13_798 0.19 +0.2 898,538 - PfGW456L13_798 0.19 +1.3 898,538 - PfGW456L13_798 0.19 +0.1 898,538 - PfGW456L13_798 0.19 -0.1 898,703 + PfGW456L13_798 0.44 +0.5 898,703 + PfGW456L13_798 0.44 -0.7 898,703 + PfGW456L13_798 0.44 -1.3 898,704 - PfGW456L13_798 0.44 +1.3 898,704 - PfGW456L13_798 0.44 -3.5 898,704 - PfGW456L13_798 0.44 -0.7 898,704 - PfGW456L13_798 0.44 +0.3 898,741 - PfGW456L13_798 0.49 -2.1 899,067 + +0.3 899,093 + -1.7 899,093 + +1.8 899,093 + +1.2 899,093 + +3.2 899,093 + +0.3 899,094 - -1.2 899,189 + +1.9 899,189 + -1.5 899,190 - -1.1 899,207 + +1.8 899,207 + +1.9 899,207 + -1.3 899,208 - -2.0 899,208 - -0.5 899,228 + -1.2 899,229 - +1.3 899,229 - -1.6 899,229 - -2.9
Or see this region's nucleotide sequence