Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4940

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
5,518,929	+		PfGW456L13_4939	0.56	-0.5
5,518,929	+		PfGW456L13_4939	0.56	+0.9
5,518,929	+		PfGW456L13_4939	0.56	+0.6
5,518,929	+		PfGW456L13_4939	0.56	+0.6
5,518,930	-		PfGW456L13_4939	0.56	+2.3
5,518,930	-		PfGW456L13_4939	0.56	+1.4
5,518,930	-		PfGW456L13_4939	0.56	+0.1
5,518,930	-		PfGW456L13_4939	0.56	+0.6
5,519,079	+		PfGW456L13_4939	0.66	-2.2
5,519,079	+		PfGW456L13_4939	0.66	+3.3
5,519,080	-		PfGW456L13_4939	0.66	+0.6
5,519,080	-		PfGW456L13_4939	0.66	+0.2
5,519,108	+		PfGW456L13_4939	0.68	+0.6
5,519,108	+		PfGW456L13_4939	0.68	+1.9
5,519,108	+		PfGW456L13_4939	0.68	-0.4
5,519,108	+		PfGW456L13_4939	0.68	-3.5
5,519,108	+		PfGW456L13_4939	0.68	+1.9
5,519,108	+		PfGW456L13_4939	0.68	-0.3
5,519,109	-		PfGW456L13_4939	0.68	-1.6
5,519,109	-		PfGW456L13_4939	0.68	-2.9
5,519,126	+		PfGW456L13_4939	0.69	-2.5
5,519,126	+		PfGW456L13_4939	0.69	+2.0
5,519,127	-		PfGW456L13_4939	0.69	+1.0
5,519,267	+		PfGW456L13_4939	0.78	+0.7
5,519,268	-		PfGW456L13_4939	0.78	+1.9
5,519,448	+		PfGW456L13_4939	0.90	-2.3
5,519,449	-		PfGW456L13_4939	0.90	+0.8
5,519,449	-		PfGW456L13_4939	0.90	-3.4
5,519,480	+				-3.6
5,519,480	+				+0.1
5,519,481	-				+0.2
5,519,550	+				+0.9
5,519,550	+				+1.8
5,519,551	-				-2.2
5,519,551	-				-1.6
5,519,693	+				-1.4
5,519,693	+				+0.2
5,519,693	+				+1.3
5,519,693	+				-2.8
5,519,694	-				-0.9
5,519,694	-				+0.2
5,519,694	-				-0.4
5,519,694	-				-0.1
5,519,694	-				-2.1
5,519,713	-				+0.7
5,519,799	+				-1.3
5,519,799	+				+2.2
5,519,799	+				+0.9
5,519,799	+				+0.2
5,519,799	+				+0.7
5,519,800	-				+1.1
5,519,800	-				-0.2
5,519,800	-				-3.1
5,519,800	-				+1.4
5,519,800	-				+0.2
5,519,800	-				+1.9
5,519,800	-				-0.7
5,519,800	-				-0.9
5,519,800	-				-2.1
5,519,800	-				+0.1
5,519,800	-				+3.4
5,519,801	+				+1.1
5,519,801	+				+0.6
5,519,801	+				-0.5
5,519,801	+				+1.0
5,519,801	+				+1.3
5,519,801	+				-0.4
5,519,801	+				+2.6
5,519,801	+				+0.1
5,519,801	+				+0.6
5,519,801	+				-0.7
5,519,801	+				-2.8
5,519,801	+				+0.7
5,519,801	+				-0.4
5,519,801	+				+2.1
5,519,801	+				-2.4
5,519,801	+				-0.9
5,519,801	+				-2.8
5,519,801	+				-2.3
5,519,801	+				-0.2
5,519,801	+				+2.0
5,519,801	+				+0.6
5,519,801	+				+0.4
5,519,801	+				-1.6
5,519,801	+				-3.6
5,519,801	+				+0.5
5,519,801	+				-0.3
5,519,801	+				+0.0
5,519,802	-				-0.1
5,519,802	-				+1.3
5,519,802	-				+0.8
5,519,802	-				-0.6
5,519,802	-				+2.6
5,519,802	-				-0.2
5,519,802	-				-0.6
5,519,802	-				-1.7
5,519,802	-				-0.0
5,519,802	-				+0.1
5,519,802	-				-2.4
5,519,802	-				+2.2
5,519,802	-				+2.0
5,519,802	-				+0.5
5,519,802	-				-1.1
5,519,802	-				-0.8
5,519,802	-				-0.6
5,519,802	-				-3.5
5,519,802	-				+0.5
5,519,802	-				-0.5
5,519,802	-				+0.4
5,519,802	-				+1.4
5,519,802	-				-0.5
5,519,802	-				-0.3
5,519,802	-				+0.1
5,519,802	-				-3.2
5,519,802	-				-3.0
5,519,802	-				+0.4
5,519,802	-				+2.3
5,519,802	-				+0.4
5,519,802	-				+1.8
5,519,802	-				-1.8
5,519,802	-				+1.0
5,519,849	+				+1.8
5,519,849	+				-0.9
5,519,850	-				-1.8
5,519,850	-				-1.8
5,520,091	+		PfGW456L13_4940	0.32	+1.6
5,520,092	-		PfGW456L13_4940	0.32	+0.3
5,520,092	-		PfGW456L13_4940	0.32	+1.3
5,520,171	+		PfGW456L13_4940	0.41	+0.8
5,520,171	+		PfGW456L13_4940	0.41	+1.9
5,520,171	+		PfGW456L13_4940	0.41	-0.6
5,520,171	+		PfGW456L13_4940	0.41	-1.6
5,520,171	+		PfGW456L13_4940	0.41	-1.0
5,520,171	+		PfGW456L13_4940	0.41	+1.3
5,520,171	+		PfGW456L13_4940	0.41	-1.6
5,520,171	+		PfGW456L13_4940	0.41	-3.1
5,520,171	+		PfGW456L13_4940	0.41	-1.9
5,520,171	+		PfGW456L13_4940	0.41	+0.4
5,520,171	+		PfGW456L13_4940	0.41	+0.3
5,520,171	+		PfGW456L13_4940	0.41	+2.5
5,520,171	+		PfGW456L13_4940	0.41	-2.3
5,520,172	-		PfGW456L13_4940	0.41	-0.3
5,520,172	-		PfGW456L13_4940	0.41	-1.4
5,520,172	-		PfGW456L13_4940	0.41	-0.2
5,520,172	-		PfGW456L13_4940	0.41	-3.5
5,520,208	+		PfGW456L13_4940	0.45	+0.1
5,520,208	+		PfGW456L13_4940	0.45	-1.7
5,520,208	+		PfGW456L13_4940	0.45	-2.5
5,520,208	+		PfGW456L13_4940	0.45	-2.6
5,520,209	-		PfGW456L13_4940	0.45	+2.5
5,520,209	-		PfGW456L13_4940	0.45	-0.4
5,520,552	+		PfGW456L13_4940	0.83	-0.6
5,520,552	+		PfGW456L13_4940	0.83	+1.3
5,520,552	+		PfGW456L13_4940	0.83	-1.6
5,520,552	+		PfGW456L13_4940	0.83	+1.5
5,520,552	+		PfGW456L13_4940	0.83	+0.0
5,520,552	+		PfGW456L13_4940	0.83	+0.4
5,520,552	+		PfGW456L13_4940	0.83	-1.3
5,520,552	+		PfGW456L13_4940	0.83	-0.1
5,520,553	-		PfGW456L13_4940	0.83	-2.0
5,520,553	-		PfGW456L13_4940	0.83	+0.2
5,520,553	-		PfGW456L13_4940	0.83	-0.5
5,520,553	-		PfGW456L13_4940	0.83	-1.8
5,520,553	-		PfGW456L13_4940	0.83	+1.0
5,520,553	-		PfGW456L13_4940	0.83	-1.6
5,520,553	-		PfGW456L13_4940	0.83	+0.0
5,520,556	+		PfGW456L13_4940	0.83	-2.5
5,520,556	+		PfGW456L13_4940	0.83	-1.5
5,520,556	+		PfGW456L13_4940	0.83	-3.3
5,520,556	+		PfGW456L13_4940	0.83	-2.2
5,520,915	+		PfGW456L13_4941	0.43	+0.2
5,520,916	-		PfGW456L13_4941	0.43	-1.8
5,520,990	+		PfGW456L13_4941	0.59	-1.2
5,520,990	+		PfGW456L13_4941	0.59	+0.0
5,520,990	+		PfGW456L13_4941	0.59	+0.7
5,520,990	+		PfGW456L13_4941	0.59	-0.8
5,520,990	+		PfGW456L13_4941	0.59	-1.3
5,520,990	+		PfGW456L13_4941	0.59	+1.3
5,520,990	+		PfGW456L13_4941	0.59	-1.0
5,520,990	+		PfGW456L13_4941	0.59	-2.4
5,520,990	+		PfGW456L13_4941	0.59	+1.1
5,520,990	+		PfGW456L13_4941	0.59	-1.6
5,520,991	-		PfGW456L13_4941	0.59	+0.3
5,520,991	-		PfGW456L13_4941	0.59	-0.4
5,520,991	-		PfGW456L13_4941	0.59	-0.6
5,520,991	-		PfGW456L13_4941	0.59	-1.6
5,520,991	-		PfGW456L13_4941	0.59	+0.9
5,520,991	-		PfGW456L13_4941	0.59	-3.3
5,520,991	-		PfGW456L13_4941	0.59	+0.4
5,520,991	-		PfGW456L13_4941	0.59	-0.9
5,520,991	-		PfGW456L13_4941	0.59	-1.7
5,520,991	-		PfGW456L13_4941	0.59	+2.5
5,520,991	-		PfGW456L13_4941	0.59	-3.2
5,520,991	-		PfGW456L13_4941	0.59	+1.4
5,520,991	-		PfGW456L13_4941	0.59	+0.9
5,520,991	-		PfGW456L13_4941	0.59	-2.8
5,520,992	+		PfGW456L13_4941	0.59	+0.3
5,521,108	+		PfGW456L13_4941	0.83	+2.1
5,521,108	+		PfGW456L13_4941	0.83	-0.6
5,521,108	+		PfGW456L13_4941	0.83	+0.7
5,521,108	+		PfGW456L13_4941	0.83	-1.6
5,521,108	+		PfGW456L13_4941	0.83	+2.4
5,521,109	-		PfGW456L13_4941	0.83	+0.8
5,521,109	-		PfGW456L13_4941	0.83	+0.9
5,521,109	-		PfGW456L13_4941	0.83	-2.5
5,521,140	+		PfGW456L13_4941	0.90	-1.9
5,521,141	-		PfGW456L13_4941	0.90	+1.8
5,521,141	-		PfGW456L13_4941	0.90	+0.6
5,521,141	-		PfGW456L13_4941	0.90	+0.6
5,521,233	+				+2.6
5,521,233	+				-0.9
5,521,233	+				-0.8
5,521,233	+				-3.7
5,521,233	+				+1.4
5,521,234	-				-0.9
5,521,234	-				-1.4
5,521,234	-				+2.4
5,521,234	-				+0.0
5,521,234	-				-2.0
5,521,234	-				+0.4
5,521,234	-				+1.6
5,521,290	+				+0.6
5,521,290	+				+0.6
5,521,291	-				+0.7
5,521,291	-				-1.0
5,521,291	-				+0.7
5,521,291	-				-1.9
5,521,291	-				-0.3
5,521,291	-				+1.2
5,521,303	+				-0.1
5,521,303	+				-1.9
5,521,303	+				-3.9
5,521,303	+				+0.2
5,521,304	-				-0.8
5,521,304	-				+2.3
5,521,304	-				+0.1
5,521,304	-				-3.0
5,521,304	-				+1.3
5,521,304	-				-1.0
5,521,427	+		PfGW456L13_4942	0.26	+1.4
5,521,427	+				+2.0
5,521,427	+		PfGW456L13_4942	0.26	-4.1
5,521,428	-		PfGW456L13_4942	0.26	-0.1
5,521,428	-		PfGW456L13_4942	0.26	+2.0
5,521,428	-		PfGW456L13_4942	0.26	-0.9
5,521,598	+		PfGW456L13_4942	0.78	-0.3
5,521,598	+		PfGW456L13_4942	0.78	-0.9
5,521,598	+		PfGW456L13_4942	0.78	+2.5
5,521,598	+		PfGW456L13_4942	0.78	+1.5
5,521,599	-		PfGW456L13_4942	0.78	-3.9
5,521,599	-		PfGW456L13_4942	0.78	+2.1
5,521,599	-		PfGW456L13_4942	0.78	+1.3
5,521,622	+		PfGW456L13_4942	0.85	+0.2
5,521,622	+		PfGW456L13_4942	0.85	+1.9
5,521,622	+		PfGW456L13_4942	0.85	+1.1
5,521,623	-		PfGW456L13_4942	0.86	-0.1
5,521,623	-		PfGW456L13_4942	0.86	-0.9
5,521,623	-		PfGW456L13_4942	0.86	-4.0
5,521,678	+				+0.0
5,521,678	+				-1.2