Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4890

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
5,460,261	+		PfGW456L13_4888	0.20	-3.3
5,460,262	-		PfGW456L13_4888	0.21	+0.4
5,460,314	+		PfGW456L13_4888	0.44	+0.7
5,460,314	+		PfGW456L13_4888	0.44	-0.2
5,460,314	+		PfGW456L13_4888	0.44	+1.4
5,460,314	+		PfGW456L13_4888	0.44	+0.5
5,460,314	+		PfGW456L13_4888	0.44	+0.2
5,460,315	-		PfGW456L13_4888	0.45	+1.9
5,460,315	-		PfGW456L13_4888	0.45	-1.5
5,460,315	-		PfGW456L13_4888	0.45	+0.6
5,460,325	-		PfGW456L13_4888	0.49	-2.7
5,460,325	-		PfGW456L13_4888	0.49	-2.2
5,460,325	-		PfGW456L13_4888	0.49	-2.5
5,460,325	-		PfGW456L13_4888	0.49	-0.6
5,460,488	+				+0.2
5,460,489	-				+0.4
5,460,515	-				-1.8
5,460,515	-				+1.4
5,460,586	+				-2.0
5,460,586	+				+1.5
5,460,587	-				-0.3
5,460,587	-				-0.0
5,460,593	+				+0.8
5,460,594	-				+1.2
5,460,737	+		PfGW456L13_4889	0.42	+1.6
5,460,770	+		PfGW456L13_4889	0.52	-0.5
5,460,770	+		PfGW456L13_4889	0.52	-2.1
5,460,770	+		PfGW456L13_4889	0.52	-3.4
5,460,770	+		PfGW456L13_4889	0.52	-0.6
5,460,770	+		PfGW456L13_4889	0.52	-0.3
5,460,770	+		PfGW456L13_4889	0.52	+1.2
5,460,770	+		PfGW456L13_4889	0.52	-1.2
5,460,770	+		PfGW456L13_4889	0.52	+0.9
5,460,770	+		PfGW456L13_4889	0.52	-3.7
5,460,771	-		PfGW456L13_4889	0.52	+1.0
5,460,771	-		PfGW456L13_4889	0.52	+2.0
5,460,771	-		PfGW456L13_4889	0.52	+1.9
5,460,782	-		PfGW456L13_4889	0.56	-1.6
5,460,871	+		PfGW456L13_4889	0.82	+1.2
5,460,871	+		PfGW456L13_4889	0.82	-2.2
5,460,893	+		PfGW456L13_4889	0.88	-2.0
5,460,893	+		PfGW456L13_4889	0.88	-0.3
5,460,893	+		PfGW456L13_4889	0.88	+0.2
5,460,894	-		PfGW456L13_4889	0.88	-4.0
5,460,894	-		PfGW456L13_4889	0.88	+0.5
5,460,983	+				-2.1
5,460,984	-				+1.9
5,461,026	+				-1.0
5,461,026	+				+0.3
5,461,026	+				-1.6
5,461,036	+				-2.0
5,461,037	-				+0.9
5,461,052	+				+0.6
5,461,052	+				+0.6
5,461,052	+				+1.1
5,461,053	-				+1.2
5,461,078	+				+1.0
5,461,079	-				-2.3
5,461,110	+				-2.9
5,461,110	+				+0.5
5,461,111	-				+0.8
5,461,155	+				+0.7
5,461,156	-				-0.4
5,461,204	+				-0.7
5,461,205	-				-2.0
5,461,205	-				-3.1
5,461,660	+		PfGW456L13_4890	0.26	-0.1
5,461,841	-		PfGW456L13_4890	0.37	+0.5
5,461,841	-		PfGW456L13_4890	0.37	-3.6
5,461,841	-		PfGW456L13_4890	0.37	-2.3
5,461,879	+		PfGW456L13_4890	0.40	+0.3
5,462,098	+				-0.2
5,462,131	+		PfGW456L13_4890	0.55	-0.0
5,462,179	+		PfGW456L13_4890	0.58	+3.7
5,462,179	+		PfGW456L13_4890	0.58	+1.4
5,462,179	+		PfGW456L13_4890	0.58	-2.7
5,462,179	+		PfGW456L13_4890	0.58	-2.9
5,462,179	+		PfGW456L13_4890	0.58	+1.0
5,462,179	+		PfGW456L13_4890	0.58	+1.5
5,462,179	+		PfGW456L13_4890	0.58	+1.5
5,462,179	+		PfGW456L13_4890	0.58	-3.0
5,462,180	+		PfGW456L13_4890	0.58	+2.7
5,462,180	-		PfGW456L13_4890	0.58	-0.9
5,462,180	-		PfGW456L13_4890	0.58	-0.8
5,462,180	-		PfGW456L13_4890	0.58	+1.9
5,462,180	-		PfGW456L13_4890	0.58	-1.0
5,462,180	-		PfGW456L13_4890	0.58	-2.0
5,462,180	-		PfGW456L13_4890	0.58	+1.2
5,462,180	-		PfGW456L13_4890	0.58	+0.4
5,462,180	-		PfGW456L13_4890	0.58	-3.4
5,462,216	-		PfGW456L13_4890	0.60	-0.7
5,462,275	+		PfGW456L13_4890	0.64	+1.5
5,462,275	+		PfGW456L13_4890	0.64	+1.6
5,462,276	-		PfGW456L13_4890	0.64	+0.9
5,462,276	-		PfGW456L13_4890	0.64	+0.3
5,462,311	+		PfGW456L13_4890	0.66	+0.8
5,462,312	-		PfGW456L13_4890	0.66	+0.8
5,462,356	+		PfGW456L13_4890	0.69	+2.6
5,462,446	+		PfGW456L13_4890	0.74	+0.8
5,462,629	+		PfGW456L13_4890	0.85	-0.2
5,462,734	+				-3.0
5,462,734	+				+1.2
5,462,741	-				-1.8
5,462,741	-				-0.9
5,462,783	-				+1.0
5,462,824	+				+0.1
5,462,830	+				+0.1
5,462,830	+				-3.9
5,462,831	-				+1.4
5,462,874	+				-2.8
5,462,920	+				+1.1
5,462,989	+				+0.4
5,462,989	+				-3.4
5,463,019	+				+1.8
5,463,019	+				+1.1
5,463,020	-				-0.6
5,463,076	+		PfGW456L13_4891	0.10	+2.1
5,463,076	+		PfGW456L13_4891	0.10	+0.1
5,463,076	+		PfGW456L13_4891	0.10	-1.6
5,463,076	+		PfGW456L13_4891	0.10	+1.0
5,463,076	+		PfGW456L13_4891	0.10	-1.9
5,463,076	+		PfGW456L13_4891	0.10	+1.4
5,463,076	+		PfGW456L13_4891	0.10	+0.5
5,463,076	+		PfGW456L13_4891	0.10	-0.1
5,463,076	+		PfGW456L13_4891	0.10	-3.2
5,463,076	+		PfGW456L13_4891	0.10	+1.4
5,463,077	-		PfGW456L13_4891	0.10	-0.3
5,463,077	-		PfGW456L13_4891	0.10	+1.4
5,463,077	-		PfGW456L13_4891	0.10	+1.2
5,463,077	-		PfGW456L13_4891	0.10	-0.7
5,463,077	-		PfGW456L13_4891	0.10	+0.7
5,463,077	-		PfGW456L13_4891	0.10	-2.2
5,463,077	-		PfGW456L13_4891	0.10	-0.6
5,463,077	-		PfGW456L13_4891	0.10	-0.6
5,463,077	-		PfGW456L13_4891	0.10	-0.9
5,463,077	-		PfGW456L13_4891	0.10	-1.5
5,463,077	-		PfGW456L13_4891	0.10	+0.4
5,463,077	-		PfGW456L13_4891	0.10	+1.2
5,463,077	-		PfGW456L13_4891	0.10	-3.0
5,463,082	+		PfGW456L13_4891	0.11	+0.7
5,463,083	-		PfGW456L13_4891	0.11	+0.1
5,463,110	-		PfGW456L13_4891	0.12	-3.3
5,463,352	+		PfGW456L13_4891	0.26	+1.7
5,463,353	-		PfGW456L13_4891	0.26	-3.3
5,463,353	-		PfGW456L13_4891	0.26	-0.0
5,463,353	-		PfGW456L13_4891	0.26	-3.7
5,463,353	-		PfGW456L13_4891	0.26	-3.2
5,463,353	-		PfGW456L13_4891	0.26	+0.5
5,463,409	+		PfGW456L13_4891	0.29	+0.8
5,463,501	+		PfGW456L13_4891	0.34	+1.2
5,463,544	+		PfGW456L13_4891	0.36	-2.9
5,463,544	+		PfGW456L13_4891	0.36	+0.7
5,463,544	+		PfGW456L13_4891	0.36	+1.0
5,463,574	+		PfGW456L13_4891	0.38	+2.1
5,463,574	+		PfGW456L13_4891	0.38	-3.3
5,463,574	+		PfGW456L13_4891	0.38	-1.3
5,463,790	+		PfGW456L13_4891	0.50	+0.5
5,463,790	+		PfGW456L13_4891	0.50	-1.3
5,463,790	+		PfGW456L13_4891	0.50	+0.2
5,463,790	+		PfGW456L13_4891	0.50	+0.8
5,463,791	-		PfGW456L13_4891	0.50	-0.2
5,463,791	-		PfGW456L13_4891	0.50	-2.2
5,463,791	-		PfGW456L13_4891	0.50	-1.0