Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1299

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
1,438,299	-		PfGW456L13_1298	0.64	+0.2
1,438,577	+		PfGW456L13_1298	0.77	-1.2
1,438,647	-		PfGW456L13_1298	0.81	-1.0
1,438,695	+		PfGW456L13_1298	0.83	+3.3
1,438,696	-		PfGW456L13_1298	0.83	-0.9
1,438,696	-		PfGW456L13_1298	0.83	-0.8
1,438,696	-		PfGW456L13_1298	0.83	-1.3
1,438,773	+		PfGW456L13_1298	0.86	+0.9
1,438,774	-		PfGW456L13_1298	0.87	+2.0
1,438,919	+				+0.4
1,438,950	+				-0.1
1,439,059	-				+0.3
1,439,059	-				-0.1
1,439,070	+				+0.8
1,439,152	+				-0.4
1,439,214	+				-0.0
1,439,214	+				+1.6
1,439,215	-				-1.9
1,439,215	-				+2.1
1,439,215	-				-0.8
1,439,224	+				-0.6
1,439,225	-				-2.0
1,439,230	+				-1.4
1,439,230	+				+0.8
1,439,231	-				-0.3
1,439,231	-				-0.1
1,439,322	+				-3.4
1,439,323	-				+1.0
1,439,323	-				+0.1
1,439,324	+				-1.5
1,439,324	+				+2.0
1,439,324	+				+2.0
1,439,324	+				+0.8
1,439,324	+				+0.6
1,439,324	+				+0.0
1,439,324	+				-0.8
1,439,324	+				+0.3
1,439,324	+				+2.8
1,439,325	-				+0.3
1,439,325	-				+0.3
1,439,325	-				+0.3
1,439,325	-				+0.6
1,439,325	-				+2.4
1,439,551	+				+0.3
1,439,551	+				+2.0
1,439,552	-				-1.5
1,439,740	+		PfGW456L13_1299	0.12	-0.8
1,439,749	+		PfGW456L13_1299	0.12	+0.3
1,439,750	-		PfGW456L13_1299	0.12	+0.7
1,439,750	-		PfGW456L13_1299	0.12	-1.2
1,439,750	-		PfGW456L13_1299	0.12	+0.2
1,440,154	-		PfGW456L13_1299	0.22	+3.5
1,440,154	-		PfGW456L13_1299	0.22	+2.1
1,440,355	+		PfGW456L13_1299	0.27	+0.1
1,440,355	+		PfGW456L13_1299	0.27	-0.8
1,440,355	+		PfGW456L13_1299	0.27	+0.4
1,440,356	-		PfGW456L13_1299	0.27	-1.0
1,440,356	-		PfGW456L13_1299	0.27	+0.8
1,440,356	-		PfGW456L13_1299	0.27	-1.0
1,440,356	-		PfGW456L13_1299	0.27	-1.4
1,440,418	+		PfGW456L13_1299	0.28	+2.0
1,440,438	+		PfGW456L13_1299	0.28	+1.0
1,440,438	+		PfGW456L13_1299	0.28	-1.0
1,440,438	+		PfGW456L13_1299	0.28	+1.3
1,440,439	-		PfGW456L13_1299	0.28	+1.3
1,440,439	-		PfGW456L13_1299	0.28	+2.0
1,440,946	+		PfGW456L13_1299	0.40	+0.4
1,440,946	+		PfGW456L13_1299	0.40	+1.1
1,440,946	+		PfGW456L13_1299	0.40	+2.1
1,440,946	+		PfGW456L13_1299	0.40	+0.9
1,440,946	+		PfGW456L13_1299	0.40	+1.6
1,440,946	+		PfGW456L13_1299	0.40	-3.1
1,440,946	+		PfGW456L13_1299	0.40	-3.0
1,440,946	+		PfGW456L13_1299	0.40	-1.8
1,440,946	+		PfGW456L13_1299	0.40	+1.1
1,440,946	+		PfGW456L13_1299	0.40	+0.5
1,440,946	+		PfGW456L13_1299	0.40	-2.4
1,440,946	+		PfGW456L13_1299	0.40	-1.2
1,440,946	+		PfGW456L13_1299	0.40	+0.3
1,440,947	-		PfGW456L13_1299	0.40	-0.5
1,440,979	+		PfGW456L13_1299	0.41	-0.5
1,440,979	+		PfGW456L13_1299	0.41	+1.6
1,440,979	+		PfGW456L13_1299	0.41	-1.6
1,440,979	+		PfGW456L13_1299	0.41	+0.5
1,440,979	+		PfGW456L13_1299	0.41	-0.7
1,440,979	+		PfGW456L13_1299	0.41	-1.1
1,440,980	-		PfGW456L13_1299	0.41	+1.0
1,440,980	-		PfGW456L13_1299	0.41	-0.7
1,440,980	-		PfGW456L13_1299	0.41	-0.5
1,440,980	-		PfGW456L13_1299	0.41	+0.2
1,440,980	-		PfGW456L13_1299	0.41	-0.8
1,440,980	-		PfGW456L13_1299	0.41	-1.5
1,440,980	-		PfGW456L13_1299	0.41	+1.8
1,440,980	-		PfGW456L13_1299	0.41	+1.3
1,440,981	+		PfGW456L13_1299	0.41	-0.0
1,440,982	-		PfGW456L13_1299	0.41	-0.2
1,440,982	-		PfGW456L13_1299	0.41	+2.4
1,440,982	-		PfGW456L13_1299	0.41	-1.0
1,441,384	-		PfGW456L13_1299	0.50	+0.6
1,441,647	+		PfGW456L13_1299	0.56	-2.1
1,441,647	+		PfGW456L13_1299	0.56	-2.0
1,441,918	+		PfGW456L13_1299	0.63	+0.8
1,441,919	-		PfGW456L13_1299	0.63	+2.0
1,441,919	-		PfGW456L13_1299	0.63	+2.2
1,441,919	-		PfGW456L13_1299	0.63	+1.1
1,441,998	+		PfGW456L13_1299	0.65	+1.1
1,442,128	-		PfGW456L13_1299	0.68	+1.1
1,442,128	-		PfGW456L13_1299	0.68	-1.2
1,442,161	-		PfGW456L13_1299	0.68	-1.9
1,442,302	+		PfGW456L13_1299	0.72	-0.8
1,442,774	+		PfGW456L13_1299	0.83	+0.2
1,442,775	-		PfGW456L13_1299	0.83	+1.7
1,442,775	-		PfGW456L13_1299	0.83	-2.1
1,442,775	-		PfGW456L13_1299	0.83	-0.6
1,443,054	+		PfGW456L13_1299	0.89	-2.4
1,443,054	+		PfGW456L13_1299	0.89	+1.4
1,443,054	+		PfGW456L13_1299	0.89	+0.6
1,443,054	+		PfGW456L13_1299	0.89	+1.6
1,443,054	+		PfGW456L13_1299	0.89	-0.9
1,443,054	+		PfGW456L13_1299	0.89	-0.3
1,443,055	-		PfGW456L13_1299	0.89	-0.8
1,443,055	-		PfGW456L13_1299	0.89	+1.4
1,443,055	-		PfGW456L13_1299	0.89	-2.1
1,443,055	-		PfGW456L13_1299	0.89	-0.4
1,443,055	-		PfGW456L13_1299	0.89	-2.9
1,443,055	-		PfGW456L13_1299	0.89	-0.8
1,443,055	-		PfGW456L13_1299	0.89	+1.8
1,443,055	-		PfGW456L13_1299	0.89	+2.0
1,443,193	+				+2.2
1,443,261	+				+0.0
1,443,261	+				+0.1
1,443,261	+				-0.4
1,443,261	+				-1.3
1,443,261	+				+1.1
1,443,262	-				+0.2
1,443,262	-				+0.3
1,443,530	+				+1.0
1,443,531	-				+0.1
1,443,558	+				+3.2
1,443,558	+				-0.8
1,443,559	-				-1.2
1,443,559	-				-0.9
1,443,651	+				+0.7
1,443,651	+				+2.2
1,443,651	+				+0.6
1,443,651	+				-0.3
1,443,651	+				-0.7
1,443,652	-				-2.3
1,443,652	-				+1.1
1,443,652	-				-2.9
1,443,652	-				-2.0
1,443,652	-				-1.8
1,443,652	-				-1.1
1,443,748	+				+0.2
1,443,749	-				+1.0
1,443,749	-				-1.9
1,443,749	-				+2.0
1,443,755	+				+1.7
1,443,756	-				-1.0
1,443,806	+				-2.0
1,443,837	+				+1.4
1,443,875	+				-1.5
1,443,890	+				-2.8
1,443,890	+				-2.0
1,443,890	+				-0.4
1,444,056	+		PfGW456L13_1300	0.19	-2.0
1,444,059	+		PfGW456L13_1300	0.19	-1.4
1,444,059	+		PfGW456L13_1300	0.19	-1.3
1,444,059	+		PfGW456L13_1300	0.19	-2.3
1,444,215	+		PfGW456L13_1300	0.37	-4.2
1,444,215	+		PfGW456L13_1300	0.37	-0.7
1,444,215	+		PfGW456L13_1300	0.37	-1.9
1,444,506	+		PfGW456L13_1300	0.71	-1.4