Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4315 and Echvi_4316 are separated by 38 nucleotides Echvi_4316 and Echvi_4317 are separated by 12 nucleotides
Echvi_4315: Echvi_4315 - Secreted and surface protein containing fasciclin-like repeats, at 5,153,183 to 5,154,625
_4315
Echvi_4316: Echvi_4316 - SusD family., at 5,154,664 to 5,156,028
_4316
Echvi_4317: Echvi_4317 - TonB-linked outer membrane protein, SusC/RagA family, at 5,156,041 to 5,159,124
_4317
Position (kb)
5154
5155
5156
5157 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5153.765 kb on - strand, within Echvi_4315 at 5153.771 kb on + strand, within Echvi_4315 at 5153.886 kb on + strand, within Echvi_4315 at 5153.902 kb on - strand, within Echvi_4315 at 5153.933 kb on + strand, within Echvi_4315 at 5153.982 kb on - strand, within Echvi_4315 at 5153.983 kb on + strand, within Echvi_4315 at 5153.983 kb on + strand, within Echvi_4315 at 5153.985 kb on + strand, within Echvi_4315 at 5153.985 kb on + strand, within Echvi_4315 at 5153.985 kb on + strand, within Echvi_4315 at 5153.986 kb on - strand, within Echvi_4315 at 5153.989 kb on + strand, within Echvi_4315 at 5153.989 kb on + strand, within Echvi_4315 at 5153.990 kb on - strand, within Echvi_4315 at 5154.006 kb on - strand, within Echvi_4315 at 5154.006 kb on - strand, within Echvi_4315 at 5154.006 kb on - strand, within Echvi_4315 at 5154.006 kb on - strand, within Echvi_4315 at 5154.066 kb on + strand, within Echvi_4315 at 5154.189 kb on + strand, within Echvi_4315 at 5154.189 kb on + strand, within Echvi_4315 at 5154.189 kb on + strand, within Echvi_4315 at 5154.190 kb on - strand, within Echvi_4315 at 5154.216 kb on + strand, within Echvi_4315 at 5154.216 kb on + strand, within Echvi_4315 at 5154.216 kb on + strand, within Echvi_4315 at 5154.216 kb on + strand, within Echvi_4315 at 5154.216 kb on + strand, within Echvi_4315 at 5154.217 kb on - strand, within Echvi_4315 at 5154.217 kb on - strand, within Echvi_4315 at 5154.217 kb on - strand, within Echvi_4315 at 5154.217 kb on - strand, within Echvi_4315 at 5154.217 kb on - strand, within Echvi_4315 at 5154.217 kb on - strand, within Echvi_4315 at 5154.217 kb on - strand, within Echvi_4315 at 5154.286 kb on - strand, within Echvi_4315 at 5154.286 kb on - strand, within Echvi_4315 at 5154.385 kb on + strand, within Echvi_4315 at 5154.457 kb on + strand, within Echvi_4315 at 5154.481 kb on - strand at 5154.590 kb on + strand at 5154.590 kb on + strand at 5154.591 kb on - strand at 5154.591 kb on - strand at 5154.638 kb on + strand at 5154.638 kb on + strand at 5154.651 kb on - strand at 5154.722 kb on - strand at 5154.824 kb on + strand, within Echvi_4316 at 5154.824 kb on + strand, within Echvi_4316 at 5154.933 kb on + strand, within Echvi_4316 at 5154.934 kb on - strand, within Echvi_4316 at 5155.116 kb on - strand, within Echvi_4316 at 5155.202 kb on + strand, within Echvi_4316 at 5155.238 kb on + strand, within Echvi_4316 at 5155.238 kb on + strand, within Echvi_4316 at 5155.239 kb on - strand, within Echvi_4316 at 5155.239 kb on - strand, within Echvi_4316 at 5155.269 kb on - strand, within Echvi_4316 at 5155.316 kb on + strand, within Echvi_4316 at 5155.317 kb on - strand, within Echvi_4316 at 5155.364 kb on + strand, within Echvi_4316 at 5155.365 kb on - strand, within Echvi_4316 at 5155.382 kb on + strand, within Echvi_4316 at 5155.382 kb on + strand, within Echvi_4316 at 5155.382 kb on + strand, within Echvi_4316 at 5155.382 kb on + strand, within Echvi_4316 at 5155.383 kb on - strand, within Echvi_4316 at 5155.383 kb on - strand, within Echvi_4316 at 5155.396 kb on + strand, within Echvi_4316 at 5155.492 kb on + strand, within Echvi_4316 at 5155.608 kb on - strand, within Echvi_4316 at 5155.689 kb on - strand, within Echvi_4316 at 5155.689 kb on - strand, within Echvi_4316 at 5155.700 kb on + strand, within Echvi_4316 at 5155.700 kb on + strand at 5155.701 kb on - strand, within Echvi_4316 at 5155.877 kb on + strand, within Echvi_4316 at 5155.877 kb on + strand, within Echvi_4316 at 5155.877 kb on + strand, within Echvi_4316 at 5155.877 kb on + strand, within Echvi_4316 at 5155.878 kb on - strand, within Echvi_4316 at 5155.878 kb on - strand, within Echvi_4316 at 5155.878 kb on - strand, within Echvi_4316 at 5155.879 kb on + strand, within Echvi_4316 at 5155.880 kb on - strand, within Echvi_4316 at 5155.880 kb on - strand, within Echvi_4316 at 5155.917 kb on + strand at 5155.919 kb on + strand at 5156.042 kb on + strand at 5156.042 kb on + strand at 5156.056 kb on + strand at 5156.057 kb on - strand at 5156.062 kb on + strand at 5156.076 kb on + strand at 5156.077 kb on - strand at 5156.107 kb on + strand at 5156.153 kb on + strand at 5156.190 kb on - strand at 5156.190 kb on - strand at 5156.214 kb on + strand at 5156.273 kb on + strand at 5156.414 kb on - strand, within Echvi_4317 at 5156.425 kb on - strand, within Echvi_4317 at 5156.478 kb on + strand, within Echvi_4317 at 5156.478 kb on + strand, within Echvi_4317 at 5156.479 kb on - strand, within Echvi_4317 at 5156.479 kb on - strand, within Echvi_4317 at 5156.583 kb on + strand, within Echvi_4317 at 5156.661 kb on + strand, within Echvi_4317 at 5156.662 kb on - strand, within Echvi_4317 at 5156.925 kb on - strand, within Echvi_4317 at 5156.958 kb on + strand, within Echvi_4317 at 5156.958 kb on + strand, within Echvi_4317 at 5156.958 kb on + strand, within Echvi_4317 at 5156.958 kb on + strand, within Echvi_4317 at 5156.959 kb on - strand, within Echvi_4317 at 5156.959 kb on - strand, within Echvi_4317 at 5156.960 kb on + strand, within Echvi_4317 at 5156.960 kb on + strand, within Echvi_4317 at 5156.960 kb on + strand, within Echvi_4317 at 5156.987 kb on + strand, within Echvi_4317 at 5156.987 kb on + strand, within Echvi_4317 at 5156.988 kb on - strand, within Echvi_4317 at 5156.988 kb on - strand, within Echvi_4317 at 5156.988 kb on - strand, within Echvi_4317 at 5156.988 kb on - strand, within Echvi_4317 at 5156.988 kb on - strand, within Echvi_4317 at 5156.988 kb on - strand, within Echvi_4317 at 5156.988 kb on - strand, within Echvi_4317 at 5156.996 kb on - strand, within Echvi_4317
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 5,153,765 - Echvi_4315 0.40 -0.8 5,153,771 + Echvi_4315 0.41 -0.0 5,153,886 + Echvi_4315 0.49 -0.0 5,153,902 - Echvi_4315 0.50 -1.2 5,153,933 + Echvi_4315 0.52 -0.1 5,153,982 - Echvi_4315 0.55 -1.1 5,153,983 + Echvi_4315 0.55 -0.1 5,153,983 + Echvi_4315 0.55 +0.2 5,153,985 + Echvi_4315 0.56 -1.9 5,153,985 + Echvi_4315 0.56 -1.2 5,153,985 + Echvi_4315 0.56 +0.4 5,153,986 - Echvi_4315 0.56 -1.2 5,153,989 + Echvi_4315 0.56 +0.3 5,153,989 + Echvi_4315 0.56 +0.2 5,153,990 - Echvi_4315 0.56 -0.1 5,154,006 - Echvi_4315 0.57 -0.2 5,154,006 - Echvi_4315 0.57 +1.6 5,154,006 - Echvi_4315 0.57 +0.8 5,154,006 - Echvi_4315 0.57 -0.2 5,154,066 + Echvi_4315 0.61 -1.7 5,154,189 + Echvi_4315 0.70 +1.0 5,154,189 + Echvi_4315 0.70 +0.1 5,154,189 + Echvi_4315 0.70 -0.9 5,154,190 - Echvi_4315 0.70 -0.1 5,154,216 + Echvi_4315 0.72 -0.2 5,154,216 + Echvi_4315 0.72 +0.9 5,154,216 + Echvi_4315 0.72 +0.2 5,154,216 + Echvi_4315 0.72 +0.8 5,154,216 + Echvi_4315 0.72 -1.1 5,154,217 - Echvi_4315 0.72 +0.4 5,154,217 - Echvi_4315 0.72 -0.2 5,154,217 - Echvi_4315 0.72 -1.1 5,154,217 - Echvi_4315 0.72 -0.5 5,154,217 - Echvi_4315 0.72 +0.1 5,154,217 - Echvi_4315 0.72 +1.6 5,154,217 - Echvi_4315 0.72 -0.2 5,154,286 - Echvi_4315 0.76 +0.6 5,154,286 - Echvi_4315 0.76 -0.5 5,154,385 + Echvi_4315 0.83 +0.1 5,154,457 + Echvi_4315 0.88 -0.1 5,154,481 - +0.2 5,154,590 + +0.2 5,154,590 + -1.2 5,154,591 - +1.6 5,154,591 - -0.2 5,154,638 + +0.2 5,154,638 + +0.4 5,154,651 - -0.0 5,154,722 - -0.0 5,154,824 + Echvi_4316 0.12 +0.1 5,154,824 + Echvi_4316 0.12 +2.2 5,154,933 + Echvi_4316 0.20 +0.5 5,154,934 - Echvi_4316 0.20 +1.6 5,155,116 - Echvi_4316 0.33 -0.6 5,155,202 + Echvi_4316 0.39 +0.1 5,155,238 + Echvi_4316 0.42 +0.6 5,155,238 + Echvi_4316 0.42 +0.2 5,155,239 - Echvi_4316 0.42 -0.2 5,155,239 - Echvi_4316 0.42 +0.5 5,155,269 - Echvi_4316 0.44 +0.2 5,155,316 + Echvi_4316 0.48 +0.1 5,155,317 - Echvi_4316 0.48 +1.3 5,155,364 + Echvi_4316 0.51 -0.2 5,155,365 - Echvi_4316 0.51 +0.0 5,155,382 + Echvi_4316 0.53 +0.4 5,155,382 + Echvi_4316 0.53 -0.3 5,155,382 + Echvi_4316 0.53 -1.4 5,155,382 + Echvi_4316 0.53 -0.4 5,155,383 - Echvi_4316 0.53 -0.0 5,155,383 - Echvi_4316 0.53 -0.5 5,155,396 + Echvi_4316 0.54 -0.2 5,155,492 + Echvi_4316 0.61 -2.5 5,155,608 - Echvi_4316 0.69 -1.2 5,155,689 - Echvi_4316 0.75 -1.2 5,155,689 - Echvi_4316 0.75 +0.2 5,155,700 + Echvi_4316 0.76 -0.6 5,155,700 + +1.6 5,155,701 - Echvi_4316 0.76 -0.2 5,155,877 + Echvi_4316 0.89 -0.0 5,155,877 + Echvi_4316 0.89 +0.6 5,155,877 + Echvi_4316 0.89 -0.3 5,155,877 + Echvi_4316 0.89 -0.0 5,155,878 - Echvi_4316 0.89 -0.4 5,155,878 - Echvi_4316 0.89 -1.1 5,155,878 - Echvi_4316 0.89 +0.8 5,155,879 + Echvi_4316 0.89 +0.3 5,155,880 - Echvi_4316 0.89 -0.2 5,155,880 - Echvi_4316 0.89 +0.1 5,155,917 + +0.6 5,155,919 + -0.6 5,156,042 + +0.7 5,156,042 + +0.1 5,156,056 + +0.8 5,156,057 - -0.2 5,156,062 + -1.0 5,156,076 + -0.5 5,156,077 - -0.5 5,156,107 + +0.1 5,156,153 + +0.2 5,156,190 - -0.6 5,156,190 - -0.4 5,156,214 + -0.4 5,156,273 + -1.7 5,156,414 - Echvi_4317 0.12 +1.2 5,156,425 - Echvi_4317 0.12 -1.3 5,156,478 + Echvi_4317 0.14 -0.4 5,156,478 + Echvi_4317 0.14 -0.6 5,156,479 - Echvi_4317 0.14 -0.2 5,156,479 - Echvi_4317 0.14 +1.3 5,156,583 + Echvi_4317 0.18 -0.0 5,156,661 + Echvi_4317 0.20 +0.3 5,156,662 - Echvi_4317 0.20 -0.7 5,156,925 - Echvi_4317 0.29 +0.2 5,156,958 + Echvi_4317 0.30 -0.0 5,156,958 + Echvi_4317 0.30 -1.6 5,156,958 + Echvi_4317 0.30 +0.6 5,156,958 + Echvi_4317 0.30 -0.2 5,156,959 - Echvi_4317 0.30 +1.0 5,156,959 - Echvi_4317 0.30 -1.1 5,156,960 + Echvi_4317 0.30 -0.5 5,156,960 + Echvi_4317 0.30 -0.5 5,156,960 + Echvi_4317 0.30 -0.1 5,156,987 + Echvi_4317 0.31 -0.8 5,156,987 + Echvi_4317 0.31 -0.2 5,156,988 - Echvi_4317 0.31 -1.0 5,156,988 - Echvi_4317 0.31 -1.4 5,156,988 - Echvi_4317 0.31 +1.1 5,156,988 - Echvi_4317 0.31 -0.3 5,156,988 - Echvi_4317 0.31 -0.8 5,156,988 - Echvi_4317 0.31 -0.0 5,156,988 - Echvi_4317 0.31 +1.0 5,156,996 - Echvi_4317 0.31 -0.4
Or see this region's nucleotide sequence