Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3516 and Echvi_3517 are separated by 7 nucleotides Echvi_3517 and Echvi_3518 are separated by 565 nucleotides Echvi_3518 and Echvi_3519 are separated by 12 nucleotides Echvi_3519 and Echvi_3520 are separated by 75 nucleotides
Echvi_3516: Echvi_3516 - Relaxase/Mobilisation nuclease domain., at 4,165,548 to 4,166,723
_3516
Echvi_3517: Echvi_3517 - hypothetical protein, at 4,166,731 to 4,167,150
_3517
Echvi_3518: Echvi_3518 - hypothetical protein, at 4,167,716 to 4,168,141
_3518
Echvi_3519: Echvi_3519 - hypothetical protein, at 4,168,154 to 4,168,402
_3519
Echvi_3520: Echvi_3520 - Dual-action HEIGH metallo-peptidase., at 4,168,478 to 4,169,770
_3520
Position (kb)
4167
4168
4169 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4166.717 kb on + strand at 4166.718 kb on - strand at 4166.718 kb on - strand at 4166.743 kb on - strand at 4166.749 kb on - strand at 4166.755 kb on + strand at 4166.761 kb on + strand at 4166.762 kb on - strand at 4166.769 kb on + strand at 4166.770 kb on - strand at 4166.773 kb on + strand, within Echvi_3517 at 4166.773 kb on + strand, within Echvi_3517 at 4166.780 kb on - strand, within Echvi_3517 at 4166.801 kb on - strand, within Echvi_3517 at 4166.808 kb on + strand, within Echvi_3517 at 4166.808 kb on + strand, within Echvi_3517 at 4166.838 kb on + strand, within Echvi_3517 at 4166.838 kb on + strand, within Echvi_3517 at 4166.838 kb on + strand, within Echvi_3517 at 4166.848 kb on - strand, within Echvi_3517 at 4166.903 kb on - strand, within Echvi_3517 at 4166.903 kb on - strand, within Echvi_3517 at 4166.907 kb on + strand, within Echvi_3517 at 4166.908 kb on - strand, within Echvi_3517 at 4166.953 kb on - strand, within Echvi_3517 at 4166.954 kb on + strand, within Echvi_3517 at 4167.012 kb on - strand, within Echvi_3517 at 4167.012 kb on - strand, within Echvi_3517 at 4167.021 kb on + strand, within Echvi_3517 at 4167.022 kb on - strand, within Echvi_3517 at 4167.048 kb on + strand, within Echvi_3517 at 4167.048 kb on + strand, within Echvi_3517 at 4167.102 kb on + strand, within Echvi_3517 at 4167.121 kb on + strand at 4167.122 kb on - strand at 4167.124 kb on + strand at 4167.130 kb on + strand at 4167.131 kb on - strand at 4167.164 kb on + strand at 4167.168 kb on + strand at 4167.189 kb on + strand at 4167.190 kb on - strand at 4167.194 kb on + strand at 4167.200 kb on - strand at 4167.200 kb on - strand at 4167.200 kb on - strand at 4167.207 kb on + strand at 4167.207 kb on + strand at 4167.211 kb on + strand at 4167.212 kb on - strand at 4167.215 kb on - strand at 4167.221 kb on + strand at 4167.265 kb on + strand at 4167.266 kb on - strand at 4167.270 kb on - strand at 4167.338 kb on + strand at 4167.374 kb on + strand at 4167.391 kb on - strand at 4167.391 kb on - strand at 4167.432 kb on + strand at 4167.433 kb on - strand at 4167.433 kb on - strand at 4167.471 kb on + strand at 4167.472 kb on - strand at 4167.472 kb on - strand at 4167.472 kb on - strand at 4167.475 kb on + strand at 4167.476 kb on - strand at 4167.476 kb on - strand at 4167.480 kb on + strand at 4167.480 kb on + strand at 4167.480 kb on + strand at 4167.481 kb on - strand at 4167.481 kb on - strand at 4167.481 kb on - strand at 4167.481 kb on - strand at 4167.489 kb on - strand at 4167.489 kb on - strand at 4167.514 kb on - strand at 4167.526 kb on + strand at 4167.526 kb on + strand at 4167.527 kb on - strand at 4167.527 kb on - strand at 4167.532 kb on + strand at 4167.601 kb on + strand at 4167.602 kb on - strand at 4167.605 kb on - strand at 4167.613 kb on + strand at 4167.614 kb on - strand at 4167.647 kb on - strand at 4167.717 kb on + strand at 4167.717 kb on + strand at 4167.728 kb on + strand at 4167.745 kb on + strand at 4167.745 kb on + strand at 4167.745 kb on + strand at 4167.783 kb on + strand, within Echvi_3518 at 4167.784 kb on - strand, within Echvi_3518 at 4167.784 kb on - strand, within Echvi_3518 at 4167.806 kb on + strand, within Echvi_3518 at 4167.806 kb on + strand, within Echvi_3518 at 4167.806 kb on + strand, within Echvi_3518 at 4167.825 kb on - strand, within Echvi_3518 at 4167.843 kb on + strand, within Echvi_3518 at 4167.843 kb on + strand, within Echvi_3518 at 4167.844 kb on - strand, within Echvi_3518 at 4167.844 kb on - strand, within Echvi_3518 at 4167.844 kb on - strand, within Echvi_3518 at 4167.844 kb on - strand, within Echvi_3518 at 4167.844 kb on - strand, within Echvi_3518 at 4167.844 kb on - strand, within Echvi_3518 at 4167.848 kb on - strand, within Echvi_3518 at 4167.848 kb on - strand, within Echvi_3518 at 4167.848 kb on - strand, within Echvi_3518 at 4167.852 kb on + strand, within Echvi_3518 at 4167.852 kb on + strand, within Echvi_3518 at 4167.853 kb on - strand, within Echvi_3518 at 4167.878 kb on - strand, within Echvi_3518 at 4167.898 kb on + strand, within Echvi_3518 at 4167.899 kb on - strand, within Echvi_3518 at 4167.994 kb on + strand, within Echvi_3518 at 4167.995 kb on - strand, within Echvi_3518 at 4168.222 kb on + strand, within Echvi_3519 at 4168.271 kb on + strand, within Echvi_3519 at 4168.276 kb on + strand, within Echvi_3519 at 4168.277 kb on - strand, within Echvi_3519 at 4168.277 kb on - strand, within Echvi_3519 at 4168.363 kb on - strand, within Echvi_3519 at 4168.367 kb on - strand, within Echvi_3519 at 4168.498 kb on - strand at 4168.575 kb on + strand at 4168.705 kb on + strand, within Echvi_3520 at 4168.731 kb on - strand, within Echvi_3520 at 4168.788 kb on + strand, within Echvi_3520 at 4168.791 kb on + strand, within Echvi_3520 at 4168.792 kb on - strand, within Echvi_3520 at 4168.811 kb on + strand, within Echvi_3520 at 4168.811 kb on + strand, within Echvi_3520 at 4168.811 kb on + strand, within Echvi_3520 at 4168.818 kb on + strand, within Echvi_3520 at 4168.818 kb on + strand, within Echvi_3520 at 4168.818 kb on + strand, within Echvi_3520 at 4168.818 kb on + strand, within Echvi_3520 at 4168.818 kb on + strand, within Echvi_3520 at 4168.819 kb on - strand, within Echvi_3520 at 4168.819 kb on - strand, within Echvi_3520 at 4168.819 kb on - strand, within Echvi_3520 at 4168.819 kb on - strand, within Echvi_3520 at 4168.821 kb on + strand, within Echvi_3520 at 4168.845 kb on + strand, within Echvi_3520 at 4168.865 kb on - strand, within Echvi_3520 at 4168.902 kb on + strand, within Echvi_3520 at 4168.942 kb on + strand, within Echvi_3520 at 4168.955 kb on + strand at 4168.998 kb on - strand, within Echvi_3520 at 4169.092 kb on + strand, within Echvi_3520 at 4169.092 kb on + strand, within Echvi_3520 at 4169.108 kb on - strand, within Echvi_3520 at 4169.112 kb on - strand, within Echvi_3520 at 4169.113 kb on + strand, within Echvi_3520 at 4169.114 kb on - strand, within Echvi_3520
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 4,166,717 + +1.1 4,166,718 - +0.1 4,166,718 - -3.0 4,166,743 - -0.9 4,166,749 - -0.6 4,166,755 + +0.4 4,166,761 + +1.8 4,166,762 - -0.4 4,166,769 + -0.0 4,166,770 - +0.3 4,166,773 + Echvi_3517 0.10 -0.6 4,166,773 + Echvi_3517 0.10 +0.6 4,166,780 - Echvi_3517 0.12 -0.8 4,166,801 - Echvi_3517 0.17 +0.6 4,166,808 + Echvi_3517 0.18 +1.2 4,166,808 + Echvi_3517 0.18 +0.8 4,166,838 + Echvi_3517 0.25 -0.2 4,166,838 + Echvi_3517 0.25 -0.4 4,166,838 + Echvi_3517 0.25 -0.7 4,166,848 - Echvi_3517 0.28 +0.2 4,166,903 - Echvi_3517 0.41 +0.2 4,166,903 - Echvi_3517 0.41 +0.7 4,166,907 + Echvi_3517 0.42 -0.7 4,166,908 - Echvi_3517 0.42 -0.4 4,166,953 - Echvi_3517 0.53 -0.9 4,166,954 + Echvi_3517 0.53 +0.4 4,167,012 - Echvi_3517 0.67 -0.5 4,167,012 - Echvi_3517 0.67 +3.4 4,167,021 + Echvi_3517 0.69 +1.5 4,167,022 - Echvi_3517 0.69 +0.4 4,167,048 + Echvi_3517 0.75 +0.1 4,167,048 + Echvi_3517 0.75 +1.4 4,167,102 + Echvi_3517 0.88 -0.8 4,167,121 + +0.5 4,167,122 - -0.2 4,167,124 + -0.2 4,167,130 + +0.1 4,167,131 - -1.2 4,167,164 + +0.5 4,167,168 + -0.7 4,167,189 + +1.3 4,167,190 - -0.7 4,167,194 + +0.3 4,167,200 - +0.2 4,167,200 - +1.2 4,167,200 - +0.1 4,167,207 + +0.2 4,167,207 + +0.5 4,167,211 + -0.7 4,167,212 - -0.2 4,167,215 - +0.5 4,167,221 + +0.1 4,167,265 + +0.2 4,167,266 - +0.1 4,167,270 - -0.0 4,167,338 + +1.9 4,167,374 + +1.4 4,167,391 - -0.2 4,167,391 - -1.4 4,167,432 + -0.4 4,167,433 - -0.6 4,167,433 - +0.4 4,167,471 + -0.2 4,167,472 - +1.0 4,167,472 - +0.8 4,167,472 - -1.2 4,167,475 + -0.3 4,167,476 - +1.1 4,167,476 - +0.6 4,167,480 + +0.3 4,167,480 + -0.4 4,167,480 + +0.2 4,167,481 - -0.9 4,167,481 - +2.2 4,167,481 - +0.1 4,167,481 - -0.2 4,167,489 - +0.6 4,167,489 - -0.6 4,167,514 - -1.2 4,167,526 + +0.0 4,167,526 + +0.1 4,167,527 - -0.7 4,167,527 - +1.0 4,167,532 + -1.0 4,167,601 + +0.8 4,167,602 - -1.2 4,167,605 - -1.5 4,167,613 + +0.8 4,167,614 - +0.2 4,167,647 - +0.7 4,167,717 + +1.1 4,167,717 + -0.3 4,167,728 + -0.4 4,167,745 + -0.4 4,167,745 + -0.9 4,167,745 + +0.7 4,167,783 + Echvi_3518 0.16 +0.9 4,167,784 - Echvi_3518 0.16 +0.3 4,167,784 - Echvi_3518 0.16 +0.5 4,167,806 + Echvi_3518 0.21 +1.0 4,167,806 + Echvi_3518 0.21 -0.4 4,167,806 + Echvi_3518 0.21 +0.1 4,167,825 - Echvi_3518 0.26 +0.1 4,167,843 + Echvi_3518 0.30 +0.4 4,167,843 + Echvi_3518 0.30 +1.4 4,167,844 - Echvi_3518 0.30 +0.8 4,167,844 - Echvi_3518 0.30 +1.9 4,167,844 - Echvi_3518 0.30 +1.8 4,167,844 - Echvi_3518 0.30 -0.2 4,167,844 - Echvi_3518 0.30 +0.0 4,167,844 - Echvi_3518 0.30 +0.1 4,167,848 - Echvi_3518 0.31 -0.1 4,167,848 - Echvi_3518 0.31 -1.7 4,167,848 - Echvi_3518 0.31 -0.1 4,167,852 + Echvi_3518 0.32 -0.2 4,167,852 + Echvi_3518 0.32 -0.9 4,167,853 - Echvi_3518 0.32 +0.2 4,167,878 - Echvi_3518 0.38 +0.5 4,167,898 + Echvi_3518 0.43 +0.1 4,167,899 - Echvi_3518 0.43 +1.1 4,167,994 + Echvi_3518 0.65 +1.0 4,167,995 - Echvi_3518 0.65 +1.0 4,168,222 + Echvi_3519 0.27 -0.7 4,168,271 + Echvi_3519 0.47 -0.9 4,168,276 + Echvi_3519 0.49 +0.6 4,168,277 - Echvi_3519 0.49 +0.5 4,168,277 - Echvi_3519 0.49 -0.5 4,168,363 - Echvi_3519 0.84 +0.3 4,168,367 - Echvi_3519 0.86 +0.6 4,168,498 - -0.4 4,168,575 + +0.1 4,168,705 + Echvi_3520 0.18 +1.2 4,168,731 - Echvi_3520 0.20 -0.2 4,168,788 + Echvi_3520 0.24 -0.5 4,168,791 + Echvi_3520 0.24 +0.3 4,168,792 - Echvi_3520 0.24 -0.3 4,168,811 + Echvi_3520 0.26 -0.6 4,168,811 + Echvi_3520 0.26 -0.4 4,168,811 + Echvi_3520 0.26 +0.6 4,168,818 + Echvi_3520 0.26 -1.4 4,168,818 + Echvi_3520 0.26 -0.2 4,168,818 + Echvi_3520 0.26 -0.2 4,168,818 + Echvi_3520 0.26 -0.6 4,168,818 + Echvi_3520 0.26 -1.2 4,168,819 - Echvi_3520 0.26 +0.3 4,168,819 - Echvi_3520 0.26 +0.1 4,168,819 - Echvi_3520 0.26 -0.5 4,168,819 - Echvi_3520 0.26 -0.1 4,168,821 + Echvi_3520 0.27 -0.1 4,168,845 + Echvi_3520 0.28 -1.6 4,168,865 - Echvi_3520 0.30 -1.0 4,168,902 + Echvi_3520 0.33 -0.8 4,168,942 + Echvi_3520 0.36 -0.3 4,168,955 + +3.0 4,168,998 - Echvi_3520 0.40 +0.7 4,169,092 + Echvi_3520 0.47 +0.1 4,169,092 + Echvi_3520 0.47 +3.2 4,169,108 - Echvi_3520 0.49 +0.2 4,169,112 - Echvi_3520 0.49 -0.9 4,169,113 + Echvi_3520 0.49 +0.4 4,169,114 - Echvi_3520 0.49 +0.4
Or see this region's nucleotide sequence