Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3315 and Echvi_3316 overlap by 11 nucleotides Echvi_3316 and Echvi_3317 are separated by 135 nucleotides Echvi_3317 and Echvi_3318 are separated by 1 nucleotides Echvi_3318 and Echvi_3319 are separated by 2 nucleotides
Echvi_3315: Echvi_3315 - Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit, at 3,917,409 to 3,920,039
_3315
Echvi_3316: Echvi_3316 - rRNA methylases, at 3,920,029 to 3,920,721
_3316
Echvi_3317: Echvi_3317 - hypothetical protein, at 3,920,857 to 3,921,183
_3317
Echvi_3318: Echvi_3318 - hypothetical protein, at 3,921,185 to 3,921,484
_3318
Echvi_3319: Echvi_3319 - hypothetical protein, at 3,921,487 to 3,923,151
_3319
Position (kb)
3920
3921
3922 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3919.937 kb on + strand at 3919.937 kb on + strand at 3919.978 kb on + strand at 3919.978 kb on + strand at 3920.014 kb on + strand at 3920.014 kb on + strand at 3920.037 kb on + strand at 3920.037 kb on + strand at 3920.038 kb on - strand at 3920.038 kb on - strand at 3920.060 kb on + strand at 3920.060 kb on + strand at 3920.061 kb on - strand at 3920.065 kb on + strand at 3920.065 kb on + strand at 3920.066 kb on - strand at 3920.078 kb on - strand at 3920.150 kb on + strand, within Echvi_3316 at 3920.158 kb on - strand, within Echvi_3316 at 3920.161 kb on + strand, within Echvi_3316 at 3920.226 kb on + strand, within Echvi_3316 at 3920.226 kb on + strand, within Echvi_3316 at 3920.249 kb on - strand, within Echvi_3316 at 3920.249 kb on - strand, within Echvi_3316 at 3920.264 kb on - strand, within Echvi_3316 at 3920.295 kb on + strand, within Echvi_3316 at 3920.300 kb on - strand, within Echvi_3316 at 3920.300 kb on - strand, within Echvi_3316 at 3920.300 kb on - strand, within Echvi_3316 at 3920.305 kb on + strand, within Echvi_3316 at 3920.404 kb on - strand, within Echvi_3316 at 3920.530 kb on - strand, within Echvi_3316 at 3920.544 kb on + strand, within Echvi_3316 at 3920.564 kb on + strand, within Echvi_3316 at 3920.564 kb on + strand, within Echvi_3316 at 3920.564 kb on + strand, within Echvi_3316 at 3920.565 kb on - strand, within Echvi_3316 at 3920.565 kb on - strand, within Echvi_3316 at 3920.572 kb on + strand, within Echvi_3316 at 3920.612 kb on + strand, within Echvi_3316 at 3920.613 kb on - strand, within Echvi_3316 at 3920.615 kb on - strand, within Echvi_3316 at 3920.617 kb on + strand, within Echvi_3316 at 3920.617 kb on + strand, within Echvi_3316 at 3920.617 kb on + strand, within Echvi_3316 at 3920.617 kb on + strand, within Echvi_3316 at 3920.618 kb on - strand, within Echvi_3316 at 3920.618 kb on - strand, within Echvi_3316 at 3920.618 kb on - strand, within Echvi_3316 at 3920.618 kb on - strand, within Echvi_3316 at 3920.618 kb on - strand, within Echvi_3316 at 3920.621 kb on + strand, within Echvi_3316 at 3920.692 kb on - strand at 3920.692 kb on - strand at 3920.705 kb on - strand at 3920.716 kb on - strand at 3920.716 kb on - strand at 3920.716 kb on - strand at 3920.716 kb on - strand at 3920.719 kb on + strand at 3920.720 kb on - strand at 3920.791 kb on + strand at 3920.821 kb on + strand at 3920.821 kb on + strand at 3920.831 kb on - strand at 3920.832 kb on + strand at 3920.833 kb on - strand at 3920.842 kb on - strand at 3920.867 kb on + strand at 3920.868 kb on - strand at 3920.876 kb on + strand at 3920.877 kb on - strand at 3920.896 kb on + strand, within Echvi_3317 at 3920.898 kb on + strand, within Echvi_3317 at 3920.898 kb on + strand, within Echvi_3317 at 3920.898 kb on + strand, within Echvi_3317 at 3920.898 kb on + strand, within Echvi_3317 at 3920.899 kb on - strand, within Echvi_3317 at 3920.905 kb on + strand, within Echvi_3317 at 3920.905 kb on + strand, within Echvi_3317 at 3920.906 kb on - strand, within Echvi_3317 at 3920.906 kb on - strand, within Echvi_3317 at 3920.906 kb on - strand, within Echvi_3317 at 3920.908 kb on - strand, within Echvi_3317 at 3920.910 kb on + strand, within Echvi_3317 at 3921.002 kb on + strand, within Echvi_3317 at 3921.005 kb on + strand, within Echvi_3317 at 3921.036 kb on + strand, within Echvi_3317 at 3921.068 kb on + strand, within Echvi_3317 at 3921.069 kb on - strand, within Echvi_3317 at 3921.069 kb on - strand, within Echvi_3317 at 3921.069 kb on - strand, within Echvi_3317 at 3921.099 kb on - strand, within Echvi_3317 at 3921.099 kb on - strand, within Echvi_3317 at 3921.150 kb on - strand, within Echvi_3317 at 3921.211 kb on + strand at 3921.211 kb on + strand at 3921.211 kb on + strand at 3921.212 kb on - strand at 3921.212 kb on - strand at 3921.212 kb on - strand at 3921.212 kb on - strand at 3921.307 kb on - strand, within Echvi_3318 at 3921.313 kb on + strand, within Echvi_3318 at 3921.317 kb on - strand, within Echvi_3318 at 3921.317 kb on - strand, within Echvi_3318 at 3921.349 kb on + strand, within Echvi_3318 at 3921.349 kb on + strand, within Echvi_3318 at 3921.349 kb on + strand, within Echvi_3318 at 3921.350 kb on - strand, within Echvi_3318 at 3921.373 kb on - strand, within Echvi_3318 at 3921.417 kb on - strand, within Echvi_3318 at 3921.452 kb on + strand, within Echvi_3318 at 3921.503 kb on - strand at 3921.538 kb on - strand at 3921.606 kb on - strand at 3921.630 kb on + strand at 3921.671 kb on + strand, within Echvi_3319 at 3921.672 kb on - strand, within Echvi_3319 at 3921.672 kb on - strand, within Echvi_3319 at 3921.726 kb on + strand, within Echvi_3319 at 3921.727 kb on - strand, within Echvi_3319 at 3921.734 kb on - strand, within Echvi_3319 at 3921.758 kb on + strand, within Echvi_3319 at 3921.759 kb on - strand, within Echvi_3319 at 3921.783 kb on + strand, within Echvi_3319 at 3921.783 kb on + strand, within Echvi_3319 at 3921.784 kb on - strand, within Echvi_3319 at 3921.821 kb on - strand, within Echvi_3319 at 3921.847 kb on + strand, within Echvi_3319 at 3921.848 kb on - strand, within Echvi_3319 at 3921.848 kb on - strand, within Echvi_3319 at 3921.853 kb on + strand, within Echvi_3319 at 3921.854 kb on - strand, within Echvi_3319 at 3921.862 kb on - strand, within Echvi_3319 at 3921.862 kb on - strand, within Echvi_3319 at 3921.862 kb on - strand, within Echvi_3319 at 3921.865 kb on + strand, within Echvi_3319 at 3921.865 kb on + strand, within Echvi_3319 at 3921.868 kb on - strand, within Echvi_3319 at 3921.951 kb on + strand, within Echvi_3319 at 3921.951 kb on + strand, within Echvi_3319 at 3921.952 kb on - strand, within Echvi_3319 at 3921.952 kb on - strand, within Echvi_3319 at 3921.979 kb on - strand, within Echvi_3319 at 3922.183 kb on + strand, within Echvi_3319 at 3922.183 kb on + strand, within Echvi_3319
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 3,919,937 + +0.4 3,919,937 + -0.0 3,919,978 + +0.5 3,919,978 + -0.2 3,920,014 + +0.3 3,920,014 + -0.2 3,920,037 + +1.9 3,920,037 + -0.4 3,920,038 - -0.7 3,920,038 - +0.6 3,920,060 + +0.2 3,920,060 + -0.1 3,920,061 - +0.3 3,920,065 + +0.6 3,920,065 + +0.2 3,920,066 - +0.2 3,920,078 - -1.3 3,920,150 + Echvi_3316 0.17 +0.3 3,920,158 - Echvi_3316 0.19 -0.7 3,920,161 + Echvi_3316 0.19 -1.2 3,920,226 + Echvi_3316 0.28 +0.3 3,920,226 + Echvi_3316 0.28 +2.0 3,920,249 - Echvi_3316 0.32 -0.6 3,920,249 - Echvi_3316 0.32 -0.2 3,920,264 - Echvi_3316 0.34 -0.2 3,920,295 + Echvi_3316 0.38 -0.3 3,920,300 - Echvi_3316 0.39 +0.6 3,920,300 - Echvi_3316 0.39 -0.5 3,920,300 - Echvi_3316 0.39 -0.9 3,920,305 + Echvi_3316 0.40 +0.2 3,920,404 - Echvi_3316 0.54 -0.1 3,920,530 - Echvi_3316 0.72 -0.2 3,920,544 + Echvi_3316 0.74 +0.6 3,920,564 + Echvi_3316 0.77 -0.5 3,920,564 + Echvi_3316 0.77 +0.8 3,920,564 + Echvi_3316 0.77 +0.6 3,920,565 - Echvi_3316 0.77 -1.1 3,920,565 - Echvi_3316 0.77 +0.1 3,920,572 + Echvi_3316 0.78 +0.4 3,920,612 + Echvi_3316 0.84 +0.4 3,920,613 - Echvi_3316 0.84 -0.7 3,920,615 - Echvi_3316 0.85 -0.1 3,920,617 + Echvi_3316 0.85 -0.1 3,920,617 + Echvi_3316 0.85 -0.4 3,920,617 + Echvi_3316 0.85 -1.0 3,920,617 + Echvi_3316 0.85 -1.8 3,920,618 - Echvi_3316 0.85 -0.2 3,920,618 - Echvi_3316 0.85 +0.3 3,920,618 - Echvi_3316 0.85 +0.1 3,920,618 - Echvi_3316 0.85 -0.5 3,920,618 - Echvi_3316 0.85 +0.1 3,920,621 + Echvi_3316 0.85 +0.4 3,920,692 - +0.2 3,920,692 - +0.1 3,920,705 - -0.4 3,920,716 - +0.4 3,920,716 - -0.1 3,920,716 - -0.1 3,920,716 - +1.9 3,920,719 + +0.6 3,920,720 - -0.4 3,920,791 + +0.1 3,920,821 + -0.4 3,920,821 + -0.2 3,920,831 - -0.2 3,920,832 + -0.9 3,920,833 - -0.2 3,920,842 - +0.9 3,920,867 + +0.2 3,920,868 - +0.6 3,920,876 + -0.9 3,920,877 - -0.5 3,920,896 + Echvi_3317 0.12 -0.7 3,920,898 + Echvi_3317 0.13 +2.5 3,920,898 + Echvi_3317 0.13 -0.3 3,920,898 + Echvi_3317 0.13 -0.2 3,920,898 + Echvi_3317 0.13 +0.3 3,920,899 - Echvi_3317 0.13 -1.4 3,920,905 + Echvi_3317 0.15 -0.3 3,920,905 + Echvi_3317 0.15 +0.3 3,920,906 - Echvi_3317 0.15 +0.0 3,920,906 - Echvi_3317 0.15 -1.7 3,920,906 - Echvi_3317 0.15 -1.7 3,920,908 - Echvi_3317 0.16 -1.9 3,920,910 + Echvi_3317 0.16 -0.8 3,921,002 + Echvi_3317 0.44 -0.5 3,921,005 + Echvi_3317 0.45 -0.7 3,921,036 + Echvi_3317 0.55 +0.1 3,921,068 + Echvi_3317 0.65 -0.4 3,921,069 - Echvi_3317 0.65 -1.1 3,921,069 - Echvi_3317 0.65 +0.3 3,921,069 - Echvi_3317 0.65 -2.0 3,921,099 - Echvi_3317 0.74 +0.5 3,921,099 - Echvi_3317 0.74 +0.7 3,921,150 - Echvi_3317 0.90 +0.6 3,921,211 + +0.6 3,921,211 + -0.6 3,921,211 + -0.1 3,921,212 - -0.1 3,921,212 - +0.3 3,921,212 - -0.4 3,921,212 - -0.6 3,921,307 - Echvi_3318 0.41 +1.0 3,921,313 + Echvi_3318 0.43 -1.0 3,921,317 - Echvi_3318 0.44 -0.1 3,921,317 - Echvi_3318 0.44 +0.3 3,921,349 + Echvi_3318 0.55 +0.2 3,921,349 + Echvi_3318 0.55 -1.2 3,921,349 + Echvi_3318 0.55 -0.3 3,921,350 - Echvi_3318 0.55 -0.9 3,921,373 - Echvi_3318 0.63 +0.9 3,921,417 - Echvi_3318 0.77 -1.1 3,921,452 + Echvi_3318 0.89 +1.0 3,921,503 - +0.2 3,921,538 - -0.3 3,921,606 - +1.1 3,921,630 + -1.6 3,921,671 + Echvi_3319 0.11 +0.4 3,921,672 - Echvi_3319 0.11 +1.8 3,921,672 - Echvi_3319 0.11 -0.6 3,921,726 + Echvi_3319 0.14 -0.8 3,921,727 - Echvi_3319 0.14 +0.4 3,921,734 - Echvi_3319 0.15 -0.1 3,921,758 + Echvi_3319 0.16 +0.4 3,921,759 - Echvi_3319 0.16 -0.2 3,921,783 + Echvi_3319 0.18 +0.7 3,921,783 + Echvi_3319 0.18 -0.3 3,921,784 - Echvi_3319 0.18 +0.0 3,921,821 - Echvi_3319 0.20 -0.2 3,921,847 + Echvi_3319 0.22 -0.1 3,921,848 - Echvi_3319 0.22 -0.4 3,921,848 - Echvi_3319 0.22 -1.0 3,921,853 + Echvi_3319 0.22 +0.3 3,921,854 - Echvi_3319 0.22 +0.2 3,921,862 - Echvi_3319 0.23 +1.4 3,921,862 - Echvi_3319 0.23 +0.9 3,921,862 - Echvi_3319 0.23 +0.9 3,921,865 + Echvi_3319 0.23 +1.4 3,921,865 + Echvi_3319 0.23 +0.2 3,921,868 - Echvi_3319 0.23 -0.1 3,921,951 + Echvi_3319 0.28 -1.5 3,921,951 + Echvi_3319 0.28 -0.5 3,921,952 - Echvi_3319 0.28 +0.1 3,921,952 - Echvi_3319 0.28 +0.5 3,921,979 - Echvi_3319 0.30 +0.3 3,922,183 + Echvi_3319 0.42 -0.2 3,922,183 + Echvi_3319 0.42 -2.1
Or see this region's nucleotide sequence