Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3166 and Echvi_3167 are separated by 6 nucleotides Echvi_3167 and Echvi_3168 overlap by 4 nucleotides Echvi_3168 and Echvi_3169 are separated by 7 nucleotides Echvi_3169 and Echvi_3170 are separated by 18 nucleotides
Echvi_3166: Echvi_3166 - putative thymidine phosphorylase, at 3,772,151 to 3,773,653
_3166
Echvi_3167: Echvi_3167 - ribose-phosphate pyrophosphokinase, at 3,773,660 to 3,774,553
_3167
Echvi_3168: Echvi_3168 - hypothetical protein, at 3,774,550 to 3,775,194
_3168
Echvi_3169: Echvi_3169 - hypothetical protein, at 3,775,202 to 3,775,495
_3169
Echvi_3170: Echvi_3170 - copper-(or silver)-translocating P-type ATPase/heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase, at 3,775,514 to 3,777,616
_3170
Position (kb)
3774
3775
3776 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3773.565 kb on + strand at 3773.565 kb on + strand at 3773.566 kb on - strand at 3773.567 kb on + strand at 3773.568 kb on - strand at 3773.568 kb on - strand at 3773.569 kb on + strand at 3773.569 kb on + strand at 3773.574 kb on + strand at 3773.574 kb on + strand at 3773.574 kb on + strand at 3773.575 kb on - strand at 3773.575 kb on - strand at 3773.575 kb on - strand at 3773.576 kb on + strand at 3773.576 kb on + strand at 3773.576 kb on + strand at 3773.577 kb on - strand at 3773.577 kb on - strand at 3773.641 kb on - strand at 3773.641 kb on - strand at 3773.641 kb on - strand at 3773.641 kb on - strand at 3773.641 kb on - strand at 3773.645 kb on - strand at 3773.673 kb on + strand at 3773.673 kb on + strand at 3773.709 kb on + strand at 3773.709 kb on + strand at 3773.780 kb on - strand, within Echvi_3167 at 3773.785 kb on + strand, within Echvi_3167 at 3773.786 kb on - strand, within Echvi_3167 at 3773.786 kb on - strand, within Echvi_3167 at 3773.786 kb on - strand, within Echvi_3167 at 3773.786 kb on - strand, within Echvi_3167 at 3773.791 kb on - strand, within Echvi_3167 at 3773.791 kb on - strand, within Echvi_3167 at 3773.817 kb on + strand, within Echvi_3167 at 3773.818 kb on - strand, within Echvi_3167 at 3773.905 kb on + strand, within Echvi_3167 at 3773.917 kb on - strand, within Echvi_3167 at 3773.925 kb on - strand, within Echvi_3167 at 3773.934 kb on - strand, within Echvi_3167 at 3773.935 kb on + strand, within Echvi_3167 at 3773.956 kb on + strand, within Echvi_3167 at 3773.957 kb on - strand, within Echvi_3167 at 3774.017 kb on - strand, within Echvi_3167 at 3774.022 kb on + strand, within Echvi_3167 at 3774.022 kb on + strand, within Echvi_3167 at 3774.042 kb on + strand, within Echvi_3167 at 3774.042 kb on + strand, within Echvi_3167 at 3774.042 kb on + strand, within Echvi_3167 at 3774.043 kb on - strand, within Echvi_3167 at 3774.046 kb on + strand, within Echvi_3167 at 3774.047 kb on - strand, within Echvi_3167 at 3774.047 kb on - strand, within Echvi_3167 at 3774.047 kb on - strand, within Echvi_3167 at 3774.052 kb on + strand, within Echvi_3167 at 3774.071 kb on + strand, within Echvi_3167 at 3774.217 kb on + strand, within Echvi_3167 at 3774.218 kb on - strand, within Echvi_3167 at 3774.218 kb on - strand, within Echvi_3167 at 3774.219 kb on + strand, within Echvi_3167 at 3774.219 kb on + strand, within Echvi_3167 at 3774.220 kb on - strand at 3774.220 kb on - strand, within Echvi_3167 at 3774.225 kb on + strand, within Echvi_3167 at 3774.225 kb on + strand, within Echvi_3167 at 3774.226 kb on - strand, within Echvi_3167 at 3774.255 kb on + strand, within Echvi_3167 at 3774.282 kb on + strand, within Echvi_3167 at 3774.282 kb on + strand, within Echvi_3167 at 3774.283 kb on - strand, within Echvi_3167 at 3774.283 kb on - strand, within Echvi_3167 at 3774.283 kb on - strand, within Echvi_3167 at 3774.284 kb on + strand, within Echvi_3167 at 3774.284 kb on + strand, within Echvi_3167 at 3774.284 kb on + strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.285 kb on - strand, within Echvi_3167 at 3774.286 kb on + strand, within Echvi_3167 at 3774.286 kb on + strand, within Echvi_3167 at 3774.286 kb on + strand, within Echvi_3167 at 3774.287 kb on - strand, within Echvi_3167 at 3774.287 kb on - strand, within Echvi_3167 at 3774.287 kb on - strand, within Echvi_3167 at 3774.287 kb on - strand, within Echvi_3167 at 3774.287 kb on - strand, within Echvi_3167 at 3774.287 kb on - strand, within Echvi_3167 at 3774.295 kb on + strand, within Echvi_3167 at 3774.310 kb on - strand, within Echvi_3167 at 3774.316 kb on + strand, within Echvi_3167 at 3774.316 kb on + strand, within Echvi_3167 at 3774.317 kb on - strand, within Echvi_3167 at 3774.428 kb on - strand, within Echvi_3167 at 3774.469 kb on + strand at 3774.470 kb on - strand at 3774.470 kb on - strand at 3774.470 kb on - strand at 3774.511 kb on + strand at 3774.511 kb on + strand at 3774.512 kb on - strand at 3774.512 kb on - strand at 3774.512 kb on - strand at 3774.570 kb on - strand at 3774.575 kb on + strand at 3774.575 kb on + strand at 3774.580 kb on - strand at 3774.621 kb on + strand, within Echvi_3168 at 3774.733 kb on + strand, within Echvi_3168 at 3774.733 kb on + strand, within Echvi_3168 at 3774.746 kb on + strand, within Echvi_3168 at 3774.790 kb on + strand, within Echvi_3168 at 3774.791 kb on - strand, within Echvi_3168 at 3774.795 kb on + strand, within Echvi_3168 at 3774.795 kb on + strand, within Echvi_3168 at 3774.830 kb on + strand, within Echvi_3168 at 3774.831 kb on - strand, within Echvi_3168 at 3774.831 kb on - strand, within Echvi_3168 at 3774.836 kb on + strand, within Echvi_3168 at 3774.840 kb on - strand, within Echvi_3168 at 3774.882 kb on + strand, within Echvi_3168 at 3774.883 kb on - strand, within Echvi_3168 at 3774.883 kb on - strand, within Echvi_3168 at 3774.936 kb on + strand, within Echvi_3168 at 3774.937 kb on - strand, within Echvi_3168 at 3774.938 kb on + strand, within Echvi_3168 at 3774.939 kb on - strand, within Echvi_3168 at 3774.999 kb on - strand, within Echvi_3168 at 3775.007 kb on - strand, within Echvi_3168 at 3775.053 kb on - strand, within Echvi_3168 at 3775.057 kb on - strand, within Echvi_3168 at 3775.066 kb on + strand, within Echvi_3168 at 3775.066 kb on + strand, within Echvi_3168 at 3775.099 kb on + strand, within Echvi_3168 at 3775.101 kb on + strand, within Echvi_3168 at 3775.167 kb on + strand at 3775.167 kb on + strand at 3775.189 kb on - strand at 3775.211 kb on + strand at 3775.211 kb on + strand at 3775.256 kb on + strand, within Echvi_3169 at 3775.257 kb on - strand, within Echvi_3169 at 3775.258 kb on + strand, within Echvi_3169 at 3775.258 kb on + strand, within Echvi_3169 at 3775.333 kb on + strand, within Echvi_3169 at 3775.334 kb on - strand, within Echvi_3169 at 3775.363 kb on + strand, within Echvi_3169 at 3775.364 kb on - strand, within Echvi_3169 at 3775.400 kb on - strand, within Echvi_3169 at 3775.474 kb on + strand at 3775.500 kb on + strand at 3775.501 kb on - strand at 3775.513 kb on - strand at 3775.558 kb on + strand at 3775.603 kb on + strand at 3775.676 kb on - strand at 3775.696 kb on + strand at 3775.758 kb on + strand, within Echvi_3170 at 3775.802 kb on + strand, within Echvi_3170 at 3775.803 kb on - strand, within Echvi_3170 at 3775.915 kb on + strand, within Echvi_3170 at 3775.916 kb on - strand, within Echvi_3170 at 3775.934 kb on + strand, within Echvi_3170 at 3775.942 kb on + strand, within Echvi_3170 at 3775.945 kb on + strand, within Echvi_3170 at 3775.945 kb on + strand, within Echvi_3170 at 3775.946 kb on - strand, within Echvi_3170 at 3775.957 kb on - strand, within Echvi_3170 at 3775.992 kb on + strand, within Echvi_3170 at 3775.993 kb on - strand, within Echvi_3170 at 3775.993 kb on - strand, within Echvi_3170 at 3775.993 kb on - strand, within Echvi_3170 at 3775.993 kb on - strand, within Echvi_3170 at 3776.002 kb on + strand, within Echvi_3170 at 3776.002 kb on + strand, within Echvi_3170 at 3776.002 kb on + strand, within Echvi_3170 at 3776.003 kb on - strand, within Echvi_3170 at 3776.003 kb on - strand, within Echvi_3170 at 3776.003 kb on - strand, within Echvi_3170 at 3776.003 kb on - strand, within Echvi_3170 at 3776.003 kb on - strand, within Echvi_3170 at 3776.004 kb on + strand, within Echvi_3170 at 3776.011 kb on - strand, within Echvi_3170 at 3776.083 kb on + strand, within Echvi_3170 at 3776.120 kb on - strand, within Echvi_3170 at 3776.123 kb on - strand, within Echvi_3170 at 3776.123 kb on - strand, within Echvi_3170 at 3776.151 kb on + strand, within Echvi_3170 at 3776.152 kb on - strand, within Echvi_3170
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 3,773,565 + +0.4 3,773,565 + +0.1 3,773,566 - +0.7 3,773,567 + -2.2 3,773,568 - +0.1 3,773,568 - -0.0 3,773,569 + -0.8 3,773,569 + -0.6 3,773,574 + +0.3 3,773,574 + -0.8 3,773,574 + -0.8 3,773,575 - +1.0 3,773,575 - +0.1 3,773,575 - -0.7 3,773,576 + -0.7 3,773,576 + +0.1 3,773,576 + -1.3 3,773,577 - +0.3 3,773,577 - -0.4 3,773,641 - +0.4 3,773,641 - +0.1 3,773,641 - -0.6 3,773,641 - -0.7 3,773,641 - -0.2 3,773,645 - -0.4 3,773,673 + +1.8 3,773,673 + -0.3 3,773,709 + +0.0 3,773,709 + -1.3 3,773,780 - Echvi_3167 0.13 +0.2 3,773,785 + Echvi_3167 0.14 -0.1 3,773,786 - Echvi_3167 0.14 +1.0 3,773,786 - Echvi_3167 0.14 -0.9 3,773,786 - Echvi_3167 0.14 -0.7 3,773,786 - Echvi_3167 0.14 +0.3 3,773,791 - Echvi_3167 0.15 +0.7 3,773,791 - Echvi_3167 0.15 -0.1 3,773,817 + Echvi_3167 0.18 -0.6 3,773,818 - Echvi_3167 0.18 +0.5 3,773,905 + Echvi_3167 0.27 -2.2 3,773,917 - Echvi_3167 0.29 -1.3 3,773,925 - Echvi_3167 0.30 +1.3 3,773,934 - Echvi_3167 0.31 -0.5 3,773,935 + Echvi_3167 0.31 +0.7 3,773,956 + Echvi_3167 0.33 -0.7 3,773,957 - Echvi_3167 0.33 +0.6 3,774,017 - Echvi_3167 0.40 -0.4 3,774,022 + Echvi_3167 0.40 -0.6 3,774,022 + Echvi_3167 0.40 +0.0 3,774,042 + Echvi_3167 0.43 -1.9 3,774,042 + Echvi_3167 0.43 +0.9 3,774,042 + Echvi_3167 0.43 -0.3 3,774,043 - Echvi_3167 0.43 +0.1 3,774,046 + Echvi_3167 0.43 -0.3 3,774,047 - Echvi_3167 0.43 -0.9 3,774,047 - Echvi_3167 0.43 -0.6 3,774,047 - Echvi_3167 0.43 +0.1 3,774,052 + Echvi_3167 0.44 -0.8 3,774,071 + Echvi_3167 0.46 -1.1 3,774,217 + Echvi_3167 0.62 -2.1 3,774,218 - Echvi_3167 0.62 -0.6 3,774,218 - Echvi_3167 0.62 -0.0 3,774,219 + Echvi_3167 0.63 -1.0 3,774,219 + Echvi_3167 0.63 -0.2 3,774,220 - +0.9 3,774,220 - Echvi_3167 0.63 -0.4 3,774,225 + Echvi_3167 0.63 -1.9 3,774,225 + Echvi_3167 0.63 +1.5 3,774,226 - Echvi_3167 0.63 +0.2 3,774,255 + Echvi_3167 0.67 +0.1 3,774,282 + Echvi_3167 0.70 -0.9 3,774,282 + Echvi_3167 0.70 -0.3 3,774,283 - Echvi_3167 0.70 +0.5 3,774,283 - Echvi_3167 0.70 +0.1 3,774,283 - Echvi_3167 0.70 -0.1 3,774,284 + Echvi_3167 0.70 -2.0 3,774,284 + Echvi_3167 0.70 +0.0 3,774,284 + Echvi_3167 0.70 +1.3 3,774,285 - Echvi_3167 0.70 -0.0 3,774,285 - Echvi_3167 0.70 -1.9 3,774,285 - Echvi_3167 0.70 +0.7 3,774,285 - Echvi_3167 0.70 +1.1 3,774,285 - Echvi_3167 0.70 -0.4 3,774,285 - Echvi_3167 0.70 -0.7 3,774,285 - Echvi_3167 0.70 -0.4 3,774,285 - Echvi_3167 0.70 +0.5 3,774,286 + Echvi_3167 0.70 +0.5 3,774,286 + Echvi_3167 0.70 +0.1 3,774,286 + Echvi_3167 0.70 -0.1 3,774,287 - Echvi_3167 0.70 -0.5 3,774,287 - Echvi_3167 0.70 +0.0 3,774,287 - Echvi_3167 0.70 -0.8 3,774,287 - Echvi_3167 0.70 -0.3 3,774,287 - Echvi_3167 0.70 +1.7 3,774,287 - Echvi_3167 0.70 +0.8 3,774,295 + Echvi_3167 0.71 -2.1 3,774,310 - Echvi_3167 0.73 +0.4 3,774,316 + Echvi_3167 0.73 -0.3 3,774,316 + Echvi_3167 0.73 -1.0 3,774,317 - Echvi_3167 0.73 -0.7 3,774,428 - Echvi_3167 0.86 +0.4 3,774,469 + -0.7 3,774,470 - +0.2 3,774,470 - -0.2 3,774,470 - +0.3 3,774,511 + +1.1 3,774,511 + -0.8 3,774,512 - -0.2 3,774,512 - -0.0 3,774,512 - -0.3 3,774,570 - -0.8 3,774,575 + -0.8 3,774,575 + +1.5 3,774,580 - -0.7 3,774,621 + Echvi_3168 0.11 -3.1 3,774,733 + Echvi_3168 0.28 -1.5 3,774,733 + Echvi_3168 0.28 +0.8 3,774,746 + Echvi_3168 0.30 -0.5 3,774,790 + Echvi_3168 0.37 +0.3 3,774,791 - Echvi_3168 0.37 +0.5 3,774,795 + Echvi_3168 0.38 +0.6 3,774,795 + Echvi_3168 0.38 +2.5 3,774,830 + Echvi_3168 0.43 -1.1 3,774,831 - Echvi_3168 0.44 -0.5 3,774,831 - Echvi_3168 0.44 -0.5 3,774,836 + Echvi_3168 0.44 -0.6 3,774,840 - Echvi_3168 0.45 -0.5 3,774,882 + Echvi_3168 0.51 +0.2 3,774,883 - Echvi_3168 0.52 -0.8 3,774,883 - Echvi_3168 0.52 +0.2 3,774,936 + Echvi_3168 0.60 -1.2 3,774,937 - Echvi_3168 0.60 -1.1 3,774,938 + Echvi_3168 0.60 -1.6 3,774,939 - Echvi_3168 0.60 -0.2 3,774,999 - Echvi_3168 0.70 +1.5 3,775,007 - Echvi_3168 0.71 -0.8 3,775,053 - Echvi_3168 0.78 +0.5 3,775,057 - Echvi_3168 0.79 -0.7 3,775,066 + Echvi_3168 0.80 -0.5 3,775,066 + Echvi_3168 0.80 -0.6 3,775,099 + Echvi_3168 0.85 +0.2 3,775,101 + Echvi_3168 0.85 -1.3 3,775,167 + +0.0 3,775,167 + -2.0 3,775,189 - -2.2 3,775,211 + +0.5 3,775,211 + -0.4 3,775,256 + Echvi_3169 0.18 -0.4 3,775,257 - Echvi_3169 0.19 +1.0 3,775,258 + Echvi_3169 0.19 +0.9 3,775,258 + Echvi_3169 0.19 -1.7 3,775,333 + Echvi_3169 0.45 +0.4 3,775,334 - Echvi_3169 0.45 +0.9 3,775,363 + Echvi_3169 0.55 -0.0 3,775,364 - Echvi_3169 0.55 +0.4 3,775,400 - Echvi_3169 0.67 -0.1 3,775,474 + -0.3 3,775,500 + +1.2 3,775,501 - -0.7 3,775,513 - +0.5 3,775,558 + -0.9 3,775,603 + -0.5 3,775,676 - +0.2 3,775,696 + -2.0 3,775,758 + Echvi_3170 0.12 +0.7 3,775,802 + Echvi_3170 0.14 -0.3 3,775,803 - Echvi_3170 0.14 +0.3 3,775,915 + Echvi_3170 0.19 +0.8 3,775,916 - Echvi_3170 0.19 -0.3 3,775,934 + Echvi_3170 0.20 +1.1 3,775,942 + Echvi_3170 0.20 +0.9 3,775,945 + Echvi_3170 0.20 -0.1 3,775,945 + Echvi_3170 0.20 -0.1 3,775,946 - Echvi_3170 0.21 -0.3 3,775,957 - Echvi_3170 0.21 +1.1 3,775,992 + Echvi_3170 0.23 +0.4 3,775,993 - Echvi_3170 0.23 -0.4 3,775,993 - Echvi_3170 0.23 -0.3 3,775,993 - Echvi_3170 0.23 -0.6 3,775,993 - Echvi_3170 0.23 -0.9 3,776,002 + Echvi_3170 0.23 +0.0 3,776,002 + Echvi_3170 0.23 +0.1 3,776,002 + Echvi_3170 0.23 +2.1 3,776,003 - Echvi_3170 0.23 -0.0 3,776,003 - Echvi_3170 0.23 +1.5 3,776,003 - Echvi_3170 0.23 -0.9 3,776,003 - Echvi_3170 0.23 -0.1 3,776,003 - Echvi_3170 0.23 -0.2 3,776,004 + Echvi_3170 0.23 +0.3 3,776,011 - Echvi_3170 0.24 -0.8 3,776,083 + Echvi_3170 0.27 +0.3 3,776,120 - Echvi_3170 0.29 +2.5 3,776,123 - Echvi_3170 0.29 -0.6 3,776,123 - Echvi_3170 0.29 -0.1 3,776,151 + Echvi_3170 0.30 +1.5 3,776,152 - Echvi_3170 0.30 -2.1
Or see this region's nucleotide sequence