Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2901 and Echvi_2902 are separated by 40 nucleotides Echvi_2902 and Echvi_2903 are separated by 4 nucleotides
Echvi_2901: Echvi_2901 - hypothetical protein, at 3,475,437 to 3,476,525
_2901
Echvi_2902: Echvi_2902 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 3,476,566 to 3,477,966
_2902
Echvi_2903: Echvi_2903 - Multidrug resistance efflux pump, at 3,477,971 to 3,479,149
_2903
Position (kb)
3476
3477
3478 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3475.603 kb on + strand, within Echvi_2901 at 3475.603 kb on + strand, within Echvi_2901 at 3475.652 kb on + strand, within Echvi_2901 at 3475.652 kb on + strand, within Echvi_2901 at 3475.652 kb on + strand, within Echvi_2901 at 3475.708 kb on + strand, within Echvi_2901 at 3475.721 kb on + strand, within Echvi_2901 at 3475.722 kb on - strand, within Echvi_2901 at 3475.755 kb on + strand, within Echvi_2901 at 3475.828 kb on - strand, within Echvi_2901 at 3475.870 kb on - strand, within Echvi_2901 at 3475.879 kb on - strand, within Echvi_2901 at 3475.934 kb on + strand, within Echvi_2901 at 3475.934 kb on + strand, within Echvi_2901 at 3475.934 kb on + strand, within Echvi_2901 at 3475.946 kb on + strand, within Echvi_2901 at 3475.979 kb on - strand, within Echvi_2901 at 3475.979 kb on - strand, within Echvi_2901 at 3475.979 kb on - strand, within Echvi_2901 at 3475.980 kb on + strand, within Echvi_2901 at 3475.981 kb on - strand, within Echvi_2901 at 3476.062 kb on + strand, within Echvi_2901 at 3476.121 kb on + strand, within Echvi_2901 at 3476.121 kb on + strand, within Echvi_2901 at 3476.122 kb on - strand, within Echvi_2901 at 3476.122 kb on - strand, within Echvi_2901 at 3476.146 kb on + strand, within Echvi_2901 at 3476.206 kb on + strand, within Echvi_2901 at 3476.328 kb on + strand, within Echvi_2901 at 3476.397 kb on + strand, within Echvi_2901 at 3476.397 kb on + strand, within Echvi_2901 at 3476.398 kb on - strand, within Echvi_2901 at 3476.481 kb on + strand at 3476.482 kb on - strand at 3476.493 kb on + strand at 3476.493 kb on + strand at 3476.494 kb on - strand at 3476.494 kb on - strand at 3476.494 kb on - strand at 3476.494 kb on - strand at 3476.494 kb on - strand at 3476.549 kb on - strand at 3476.567 kb on + strand at 3476.591 kb on + strand at 3476.654 kb on + strand at 3476.654 kb on + strand at 3476.702 kb on - strand at 3476.706 kb on + strand, within Echvi_2902 at 3476.706 kb on + strand, within Echvi_2902 at 3476.706 kb on + strand, within Echvi_2902 at 3476.709 kb on - strand, within Echvi_2902 at 3476.709 kb on - strand, within Echvi_2902 at 3476.830 kb on + strand, within Echvi_2902 at 3476.851 kb on + strand, within Echvi_2902 at 3476.851 kb on + strand, within Echvi_2902 at 3476.852 kb on - strand, within Echvi_2902 at 3476.900 kb on - strand, within Echvi_2902 at 3476.904 kb on + strand, within Echvi_2902 at 3476.904 kb on + strand, within Echvi_2902 at 3476.905 kb on - strand, within Echvi_2902 at 3476.905 kb on - strand, within Echvi_2902 at 3477.022 kb on + strand, within Echvi_2902 at 3477.145 kb on - strand, within Echvi_2902 at 3477.155 kb on - strand, within Echvi_2902 at 3477.155 kb on - strand, within Echvi_2902 at 3477.235 kb on - strand, within Echvi_2902 at 3477.239 kb on + strand, within Echvi_2902 at 3477.404 kb on + strand, within Echvi_2902 at 3477.404 kb on + strand, within Echvi_2902 at 3477.406 kb on + strand, within Echvi_2902 at 3477.406 kb on + strand, within Echvi_2902 at 3477.469 kb on + strand, within Echvi_2902 at 3477.469 kb on + strand, within Echvi_2902 at 3477.469 kb on + strand, within Echvi_2902 at 3477.469 kb on + strand, within Echvi_2902 at 3477.470 kb on - strand, within Echvi_2902 at 3477.491 kb on + strand, within Echvi_2902 at 3477.499 kb on + strand, within Echvi_2902 at 3477.563 kb on - strand, within Echvi_2902 at 3477.563 kb on - strand, within Echvi_2902 at 3477.603 kb on + strand, within Echvi_2902 at 3477.603 kb on + strand, within Echvi_2902 at 3477.629 kb on - strand, within Echvi_2902 at 3477.631 kb on - strand, within Echvi_2902 at 3477.665 kb on + strand, within Echvi_2902 at 3477.714 kb on + strand, within Echvi_2902 at 3477.716 kb on + strand, within Echvi_2902 at 3477.717 kb on - strand, within Echvi_2902 at 3477.721 kb on + strand, within Echvi_2902 at 3477.721 kb on + strand, within Echvi_2902 at 3477.722 kb on - strand, within Echvi_2902 at 3477.733 kb on + strand, within Echvi_2902 at 3477.734 kb on - strand, within Echvi_2902 at 3477.897 kb on + strand at 3477.920 kb on - strand at 3477.955 kb on - strand at 3477.967 kb on - strand at 3478.034 kb on - strand at 3478.230 kb on - strand, within Echvi_2903 at 3478.235 kb on - strand, within Echvi_2903 at 3478.244 kb on - strand, within Echvi_2903 at 3478.250 kb on - strand, within Echvi_2903 at 3478.322 kb on + strand, within Echvi_2903 at 3478.322 kb on + strand, within Echvi_2903 at 3478.329 kb on - strand, within Echvi_2903 at 3478.624 kb on + strand, within Echvi_2903 at 3478.625 kb on - strand, within Echvi_2903 at 3478.712 kb on + strand, within Echvi_2903 at 3478.713 kb on - strand, within Echvi_2903 at 3478.955 kb on + strand, within Echvi_2903 at 3478.960 kb on + strand, within Echvi_2903 at 3478.960 kb on + strand, within Echvi_2903
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 3,475,603 + Echvi_2901 0.15 -1.8 3,475,603 + Echvi_2901 0.15 -0.7 3,475,652 + Echvi_2901 0.20 +1.3 3,475,652 + Echvi_2901 0.20 +1.4 3,475,652 + Echvi_2901 0.20 +1.1 3,475,708 + Echvi_2901 0.25 +1.9 3,475,721 + Echvi_2901 0.26 -1.8 3,475,722 - Echvi_2901 0.26 -1.4 3,475,755 + Echvi_2901 0.29 +1.5 3,475,828 - Echvi_2901 0.36 +0.5 3,475,870 - Echvi_2901 0.40 -1.6 3,475,879 - Echvi_2901 0.41 +0.0 3,475,934 + Echvi_2901 0.46 +0.5 3,475,934 + Echvi_2901 0.46 +0.3 3,475,934 + Echvi_2901 0.46 +0.4 3,475,946 + Echvi_2901 0.47 +1.5 3,475,979 - Echvi_2901 0.50 +0.7 3,475,979 - Echvi_2901 0.50 -0.0 3,475,979 - Echvi_2901 0.50 -0.4 3,475,980 + Echvi_2901 0.50 -0.0 3,475,981 - Echvi_2901 0.50 -0.5 3,476,062 + Echvi_2901 0.57 -2.7 3,476,121 + Echvi_2901 0.63 +0.0 3,476,121 + Echvi_2901 0.63 -0.5 3,476,122 - Echvi_2901 0.63 -0.6 3,476,122 - Echvi_2901 0.63 -0.5 3,476,146 + Echvi_2901 0.65 -0.7 3,476,206 + Echvi_2901 0.71 +0.6 3,476,328 + Echvi_2901 0.82 -0.0 3,476,397 + Echvi_2901 0.88 -0.1 3,476,397 + Echvi_2901 0.88 -0.4 3,476,398 - Echvi_2901 0.88 -1.7 3,476,481 + +1.2 3,476,482 - -0.2 3,476,493 + +0.2 3,476,493 + -1.3 3,476,494 - -0.6 3,476,494 - +0.4 3,476,494 - +0.7 3,476,494 - -0.2 3,476,494 - -1.0 3,476,549 - -0.2 3,476,567 + +0.4 3,476,591 + +0.3 3,476,654 + +0.2 3,476,654 + -1.3 3,476,702 - -0.5 3,476,706 + Echvi_2902 0.10 -0.6 3,476,706 + Echvi_2902 0.10 +0.1 3,476,706 + Echvi_2902 0.10 -0.9 3,476,709 - Echvi_2902 0.10 +0.1 3,476,709 - Echvi_2902 0.10 +0.4 3,476,830 + Echvi_2902 0.19 +0.5 3,476,851 + Echvi_2902 0.20 -0.4 3,476,851 + Echvi_2902 0.20 +1.7 3,476,852 - Echvi_2902 0.20 -0.2 3,476,900 - Echvi_2902 0.24 -1.7 3,476,904 + Echvi_2902 0.24 +0.1 3,476,904 + Echvi_2902 0.24 -0.9 3,476,905 - Echvi_2902 0.24 -1.6 3,476,905 - Echvi_2902 0.24 -0.6 3,477,022 + Echvi_2902 0.33 +0.0 3,477,145 - Echvi_2902 0.41 -0.6 3,477,155 - Echvi_2902 0.42 -0.4 3,477,155 - Echvi_2902 0.42 -0.4 3,477,235 - Echvi_2902 0.48 +0.7 3,477,239 + Echvi_2902 0.48 -0.4 3,477,404 + Echvi_2902 0.60 -0.6 3,477,404 + Echvi_2902 0.60 -0.1 3,477,406 + Echvi_2902 0.60 +1.8 3,477,406 + Echvi_2902 0.60 +2.3 3,477,469 + Echvi_2902 0.64 +0.3 3,477,469 + Echvi_2902 0.64 -1.1 3,477,469 + Echvi_2902 0.64 -0.0 3,477,469 + Echvi_2902 0.64 -1.5 3,477,470 - Echvi_2902 0.65 +0.7 3,477,491 + Echvi_2902 0.66 -1.3 3,477,499 + Echvi_2902 0.67 -2.0 3,477,563 - Echvi_2902 0.71 +0.1 3,477,563 - Echvi_2902 0.71 -1.0 3,477,603 + Echvi_2902 0.74 -0.1 3,477,603 + Echvi_2902 0.74 +0.9 3,477,629 - Echvi_2902 0.76 +0.3 3,477,631 - Echvi_2902 0.76 +0.5 3,477,665 + Echvi_2902 0.78 +0.2 3,477,714 + Echvi_2902 0.82 +0.4 3,477,716 + Echvi_2902 0.82 -0.6 3,477,717 - Echvi_2902 0.82 +0.2 3,477,721 + Echvi_2902 0.82 -1.3 3,477,721 + Echvi_2902 0.82 +0.3 3,477,722 - Echvi_2902 0.83 -1.3 3,477,733 + Echvi_2902 0.83 -0.5 3,477,734 - Echvi_2902 0.83 -1.7 3,477,897 + +0.2 3,477,920 - -0.7 3,477,955 - -0.1 3,477,967 - +0.4 3,478,034 - -0.5 3,478,230 - Echvi_2903 0.22 -0.3 3,478,235 - Echvi_2903 0.22 +1.1 3,478,244 - Echvi_2903 0.23 -1.1 3,478,250 - Echvi_2903 0.24 +0.9 3,478,322 + Echvi_2903 0.30 -1.7 3,478,322 + Echvi_2903 0.30 -1.4 3,478,329 - Echvi_2903 0.30 +0.7 3,478,624 + Echvi_2903 0.55 -0.6 3,478,625 - Echvi_2903 0.55 -1.1 3,478,712 + Echvi_2903 0.63 -0.3 3,478,713 - Echvi_2903 0.63 -1.0 3,478,955 + Echvi_2903 0.83 -2.0 3,478,960 + Echvi_2903 0.84 -1.2 3,478,960 + Echvi_2903 0.84 -0.6
Or see this region's nucleotide sequence