Experiment: m.b. Aluminum chloride 2 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1650 and Echvi_1651 are separated by 24 nucleotides Echvi_1651 and Echvi_1652 are separated by 18 nucleotides
Echvi_1650: Echvi_1650 - TonB-linked outer membrane protein, SusC/RagA family, at 1,911,751 to 1,915,035
_1650
Echvi_1651: Echvi_1651 - SusD family., at 1,915,060 to 1,916,547
_1651
Echvi_1652: Echvi_1652 - Secreted and surface protein containing fasciclin-like repeats, at 1,916,566 to 1,918,269
_1652
Position (kb)
1915
1916
1917 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1914.178 kb on - strand, within Echvi_1650 at 1914.178 kb on - strand, within Echvi_1650 at 1914.224 kb on - strand, within Echvi_1650 at 1914.224 kb on - strand, within Echvi_1650 at 1914.316 kb on - strand, within Echvi_1650 at 1914.418 kb on - strand, within Echvi_1650 at 1914.418 kb on - strand, within Echvi_1650 at 1914.463 kb on + strand, within Echvi_1650 at 1914.463 kb on + strand, within Echvi_1650 at 1914.489 kb on + strand, within Echvi_1650 at 1914.489 kb on + strand, within Echvi_1650 at 1914.490 kb on - strand, within Echvi_1650 at 1914.490 kb on - strand, within Echvi_1650 at 1914.496 kb on + strand, within Echvi_1650 at 1914.497 kb on - strand, within Echvi_1650 at 1914.536 kb on + strand, within Echvi_1650 at 1914.537 kb on - strand, within Echvi_1650 at 1914.568 kb on - strand, within Echvi_1650 at 1914.568 kb on - strand, within Echvi_1650 at 1914.581 kb on + strand, within Echvi_1650 at 1914.612 kb on - strand, within Echvi_1650 at 1914.653 kb on - strand, within Echvi_1650 at 1914.653 kb on - strand, within Echvi_1650 at 1914.653 kb on - strand, within Echvi_1650 at 1914.653 kb on - strand, within Echvi_1650 at 1914.659 kb on - strand, within Echvi_1650 at 1914.872 kb on - strand at 1914.872 kb on - strand at 1914.872 kb on - strand at 1914.893 kb on - strand at 1914.907 kb on + strand at 1914.908 kb on - strand at 1914.908 kb on - strand at 1914.910 kb on - strand at 1914.910 kb on - strand at 1915.006 kb on + strand at 1915.026 kb on - strand at 1915.026 kb on - strand at 1915.072 kb on + strand at 1915.072 kb on + strand at 1915.072 kb on + strand at 1915.073 kb on - strand at 1915.074 kb on + strand at 1915.075 kb on - strand at 1915.076 kb on + strand at 1915.081 kb on + strand at 1915.081 kb on + strand at 1915.082 kb on - strand at 1915.217 kb on - strand, within Echvi_1651 at 1915.291 kb on + strand, within Echvi_1651 at 1915.291 kb on + strand, within Echvi_1651 at 1915.292 kb on - strand, within Echvi_1651 at 1915.309 kb on - strand, within Echvi_1651 at 1915.362 kb on + strand, within Echvi_1651 at 1915.525 kb on + strand, within Echvi_1651 at 1915.526 kb on - strand, within Echvi_1651 at 1915.594 kb on - strand, within Echvi_1651 at 1915.748 kb on - strand, within Echvi_1651 at 1915.748 kb on - strand at 1915.748 kb on - strand, within Echvi_1651 at 1915.748 kb on - strand, within Echvi_1651 at 1915.811 kb on - strand, within Echvi_1651 at 1915.811 kb on - strand, within Echvi_1651 at 1915.875 kb on + strand, within Echvi_1651 at 1915.938 kb on + strand, within Echvi_1651 at 1915.938 kb on + strand, within Echvi_1651 at 1916.013 kb on + strand, within Echvi_1651 at 1916.022 kb on - strand, within Echvi_1651 at 1916.022 kb on - strand, within Echvi_1651 at 1916.029 kb on - strand, within Echvi_1651 at 1916.068 kb on + strand, within Echvi_1651 at 1916.113 kb on + strand, within Echvi_1651 at 1916.248 kb on - strand, within Echvi_1651 at 1916.412 kb on + strand at 1916.457 kb on - strand at 1916.469 kb on + strand at 1916.470 kb on - strand at 1916.470 kb on - strand at 1916.477 kb on - strand at 1916.484 kb on + strand at 1916.488 kb on + strand at 1916.488 kb on + strand at 1916.488 kb on + strand at 1916.488 kb on + strand at 1916.489 kb on - strand at 1916.508 kb on + strand at 1916.509 kb on - strand at 1916.536 kb on + strand at 1916.557 kb on + strand at 1916.582 kb on + strand at 1916.583 kb on - strand at 1916.586 kb on + strand at 1916.645 kb on + strand at 1916.645 kb on + strand at 1916.646 kb on - strand at 1916.697 kb on + strand at 1916.707 kb on + strand at 1916.736 kb on + strand at 1916.788 kb on + strand, within Echvi_1652 at 1916.788 kb on + strand, within Echvi_1652 at 1916.788 kb on + strand, within Echvi_1652 at 1916.789 kb on - strand, within Echvi_1652 at 1916.797 kb on + strand, within Echvi_1652 at 1916.798 kb on - strand, within Echvi_1652 at 1916.829 kb on - strand, within Echvi_1652 at 1916.829 kb on - strand, within Echvi_1652 at 1916.836 kb on + strand, within Echvi_1652 at 1916.836 kb on + strand, within Echvi_1652 at 1916.837 kb on - strand, within Echvi_1652 at 1916.840 kb on + strand, within Echvi_1652 at 1916.919 kb on + strand, within Echvi_1652 at 1916.920 kb on - strand, within Echvi_1652 at 1916.980 kb on + strand, within Echvi_1652 at 1916.980 kb on + strand, within Echvi_1652 at 1916.980 kb on + strand, within Echvi_1652 at 1916.980 kb on + strand, within Echvi_1652 at 1916.981 kb on - strand, within Echvi_1652 at 1917.020 kb on - strand, within Echvi_1652 at 1917.020 kb on - strand, within Echvi_1652 at 1917.060 kb on + strand, within Echvi_1652 at 1917.081 kb on + strand, within Echvi_1652 at 1917.193 kb on + strand, within Echvi_1652 at 1917.194 kb on - strand, within Echvi_1652 at 1917.275 kb on - strand, within Echvi_1652 at 1917.325 kb on - strand, within Echvi_1652 at 1917.351 kb on - strand, within Echvi_1652 at 1917.352 kb on + strand, within Echvi_1652 at 1917.361 kb on + strand, within Echvi_1652 at 1917.362 kb on - strand, within Echvi_1652 at 1917.440 kb on + strand, within Echvi_1652 at 1917.441 kb on - strand, within Echvi_1652 at 1917.441 kb on - strand, within Echvi_1652 at 1917.450 kb on + strand, within Echvi_1652 at 1917.471 kb on - strand, within Echvi_1652
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 2 mM remove 1,914,178 - Echvi_1650 0.74 -0.7 1,914,178 - Echvi_1650 0.74 -0.0 1,914,224 - Echvi_1650 0.75 -0.3 1,914,224 - Echvi_1650 0.75 -1.2 1,914,316 - Echvi_1650 0.78 +0.1 1,914,418 - Echvi_1650 0.81 -0.5 1,914,418 - Echvi_1650 0.81 -0.9 1,914,463 + Echvi_1650 0.83 +0.7 1,914,463 + Echvi_1650 0.83 +0.3 1,914,489 + Echvi_1650 0.83 -0.6 1,914,489 + Echvi_1650 0.83 +0.1 1,914,490 - Echvi_1650 0.83 +0.2 1,914,490 - Echvi_1650 0.83 -0.5 1,914,496 + Echvi_1650 0.84 -0.9 1,914,497 - Echvi_1650 0.84 +0.4 1,914,536 + Echvi_1650 0.85 +1.8 1,914,537 - Echvi_1650 0.85 +0.1 1,914,568 - Echvi_1650 0.86 +0.7 1,914,568 - Echvi_1650 0.86 -0.5 1,914,581 + Echvi_1650 0.86 +0.5 1,914,612 - Echvi_1650 0.87 +1.3 1,914,653 - Echvi_1650 0.88 -0.1 1,914,653 - Echvi_1650 0.88 -1.1 1,914,653 - Echvi_1650 0.88 +1.4 1,914,653 - Echvi_1650 0.88 -0.2 1,914,659 - Echvi_1650 0.89 -0.2 1,914,872 - -0.3 1,914,872 - -0.9 1,914,872 - -0.4 1,914,893 - -0.3 1,914,907 + -1.9 1,914,908 - -0.8 1,914,908 - -0.4 1,914,910 - -1.5 1,914,910 - -0.1 1,915,006 + +0.7 1,915,026 - -0.3 1,915,026 - -0.8 1,915,072 + -0.3 1,915,072 + +0.4 1,915,072 + -1.1 1,915,073 - -0.1 1,915,074 + +0.5 1,915,075 - +1.0 1,915,076 + -0.9 1,915,081 + -0.3 1,915,081 + +0.9 1,915,082 - -0.1 1,915,217 - Echvi_1651 0.11 +0.5 1,915,291 + Echvi_1651 0.16 -0.0 1,915,291 + Echvi_1651 0.16 +0.8 1,915,292 - Echvi_1651 0.16 -1.1 1,915,309 - Echvi_1651 0.17 +0.7 1,915,362 + Echvi_1651 0.20 -0.8 1,915,525 + Echvi_1651 0.31 -0.5 1,915,526 - Echvi_1651 0.31 +0.2 1,915,594 - Echvi_1651 0.36 +0.5 1,915,748 - Echvi_1651 0.46 -0.8 1,915,748 - +0.3 1,915,748 - Echvi_1651 0.46 -1.1 1,915,748 - Echvi_1651 0.46 -0.3 1,915,811 - Echvi_1651 0.50 +0.2 1,915,811 - Echvi_1651 0.50 -0.0 1,915,875 + Echvi_1651 0.55 +1.0 1,915,938 + Echvi_1651 0.59 -0.7 1,915,938 + Echvi_1651 0.59 -0.0 1,916,013 + Echvi_1651 0.64 -0.7 1,916,022 - Echvi_1651 0.65 -1.3 1,916,022 - Echvi_1651 0.65 -1.3 1,916,029 - Echvi_1651 0.65 -0.3 1,916,068 + Echvi_1651 0.68 -1.3 1,916,113 + Echvi_1651 0.71 -0.5 1,916,248 - Echvi_1651 0.80 -1.0 1,916,412 + -0.0 1,916,457 - -1.0 1,916,469 + -0.3 1,916,470 - -0.2 1,916,470 - +1.7 1,916,477 - -0.8 1,916,484 + -0.7 1,916,488 + +0.5 1,916,488 + +0.2 1,916,488 + -0.7 1,916,488 + -0.7 1,916,489 - -0.3 1,916,508 + -0.4 1,916,509 - -1.2 1,916,536 + -0.0 1,916,557 + +0.5 1,916,582 + -1.5 1,916,583 - -0.7 1,916,586 + -0.8 1,916,645 + -0.4 1,916,645 + -0.5 1,916,646 - +0.1 1,916,697 + +1.8 1,916,707 + -0.5 1,916,736 + +0.3 1,916,788 + Echvi_1652 0.13 +0.1 1,916,788 + Echvi_1652 0.13 +0.7 1,916,788 + Echvi_1652 0.13 -0.5 1,916,789 - Echvi_1652 0.13 -0.2 1,916,797 + Echvi_1652 0.14 +0.0 1,916,798 - Echvi_1652 0.14 +1.2 1,916,829 - Echvi_1652 0.15 -0.5 1,916,829 - Echvi_1652 0.15 -0.0 1,916,836 + Echvi_1652 0.16 -1.7 1,916,836 + Echvi_1652 0.16 +0.5 1,916,837 - Echvi_1652 0.16 +0.6 1,916,840 + Echvi_1652 0.16 -1.3 1,916,919 + Echvi_1652 0.21 -0.1 1,916,920 - Echvi_1652 0.21 +0.4 1,916,980 + Echvi_1652 0.24 -0.2 1,916,980 + Echvi_1652 0.24 +0.7 1,916,980 + Echvi_1652 0.24 -0.0 1,916,980 + Echvi_1652 0.24 -1.2 1,916,981 - Echvi_1652 0.24 -1.7 1,917,020 - Echvi_1652 0.27 +0.1 1,917,020 - Echvi_1652 0.27 +0.9 1,917,060 + Echvi_1652 0.29 +0.2 1,917,081 + Echvi_1652 0.30 -0.8 1,917,193 + Echvi_1652 0.37 -1.1 1,917,194 - Echvi_1652 0.37 +0.6 1,917,275 - Echvi_1652 0.42 -0.8 1,917,325 - Echvi_1652 0.45 +0.4 1,917,351 - Echvi_1652 0.46 -1.5 1,917,352 + Echvi_1652 0.46 +1.7 1,917,361 + Echvi_1652 0.47 +0.7 1,917,362 - Echvi_1652 0.47 -1.2 1,917,440 + Echvi_1652 0.51 +0.4 1,917,441 - Echvi_1652 0.51 +3.2 1,917,441 - Echvi_1652 0.51 -2.0 1,917,450 + Echvi_1652 0.52 +0.3 1,917,471 - Echvi_1652 0.53 +0.7
Or see this region's nucleotide sequence