Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS00555

Experiment: 30_an_mag_1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAMB_RS00550 and AMB_RS00555 overlap by 4 nucleotidesAMB_RS00555 and AMB_RS00560 are separated by 8 nucleotides AMB_RS00550: AMB_RS00550 - DUF751 domain-containing protein, at 125,307 to 127,205 _RS00550 AMB_RS00555: AMB_RS00555 - glycosyltransferase, at 127,202 to 128,143 _RS00555 AMB_RS00560: AMB_RS00560 - DegT/DnrJ/EryC1/StrS family aminotransferase, at 128,152 to 129,339 _RS00560 Position (kb) 127 128 129Strain fitness (log2 ratio) -1 0 1at 128.154 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 30_an_mag_1
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128,154 - +0.1

Or see this region's nucleotide sequence