Strain Fitness in Escherichia coli BW25113 around b2628
Experiment: Bacitracin 0.5 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Bacitracin 0.5 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,760,572 | + | yfjK | b2627 | 0.55 | +0.3 |
2,760,587 | + | yfjK | b2627 | 0.55 | +0.2 |
2,760,681 | - | yfjK | b2627 | 0.60 | -0.8 |
2,760,803 | - | yfjK | b2627 | 0.65 | -0.8 |
2,760,862 | - | yfjK | b2627 | 0.68 | -0.2 |
2,760,862 | - | yfjK | b2627 | 0.68 | +0.3 |
2,760,947 | - | yfjK | b2627 | 0.72 | -1.2 |
2,760,990 | + | yfjK | b2627 | 0.74 | +0.6 |
2,760,990 | + | yfjK | b2627 | 0.74 | +0.8 |
2,761,107 | + | yfjK | b2627 | 0.79 | +0.1 |
2,761,188 | + | yfjK | b2627 | 0.83 | +0.3 |
2,761,211 | - | yfjK | b2627 | 0.84 | -1.1 |
2,761,240 | + | yfjK | b2627 | 0.85 | -0.6 |
2,761,297 | - | yfjK | b2627 | 0.88 | +1.3 |
2,761,312 | - | yfjK | b2627 | 0.89 | +0.0 |
2,761,312 | - | yfjK | b2627 | 0.89 | -0.2 |
2,761,319 | + | yfjK | b2627 | 0.89 | -0.2 |
2,761,454 | - | +0.8 | |||
2,761,454 | - | +0.8 | |||
2,762,010 | + | yfjL | b2628 | 0.28 | +0.8 |
2,762,039 | - | yfjL | b2628 | 0.30 | +0.4 |
2,762,218 | + | yfjL | b2628 | 0.41 | +0.2 |
2,762,263 | - | yfjL | b2628 | 0.44 | +0.3 |
2,762,272 | + | yfjL | b2628 | 0.44 | -1.4 |
2,762,274 | - | yfjL | b2628 | 0.44 | +0.6 |
2,762,313 | + | yfjL | b2628 | 0.47 | +0.2 |
2,762,313 | + | yfjL | b2628 | 0.47 | +0.8 |
2,762,316 | + | yfjL | b2628 | 0.47 | +1.8 |
2,762,316 | + | yfjL | b2628 | 0.47 | +2.3 |
2,762,323 | - | yfjL | b2628 | 0.47 | +0.5 |
2,762,391 | - | yfjL | b2628 | 0.51 | +0.8 |
2,762,405 | - | yfjL | b2628 | 0.52 | +1.5 |
2,762,405 | - | yfjL | b2628 | 0.52 | -0.3 |
2,762,500 | + | yfjL | b2628 | 0.58 | +0.6 |
2,762,500 | + | yfjL | b2628 | 0.58 | -0.4 |
2,762,545 | + | yfjL | b2628 | 0.61 | -0.2 |
2,762,545 | + | yfjL | b2628 | 0.61 | +0.8 |
2,762,555 | - | yfjL | b2628 | 0.62 | +0.4 |
2,762,555 | - | yfjL | b2628 | 0.62 | +0.4 |
2,762,626 | + | yfjL | b2628 | 0.66 | +2.1 |
2,762,860 | + | yfjL | b2628 | 0.80 | -0.1 |
2,762,878 | + | yfjL | b2628 | 0.82 | +1.0 |
2,762,881 | - | yfjL | b2628 | 0.82 | +0.3 |
2,762,881 | - | yfjL | b2628 | 0.82 | +1.0 |
2,762,891 | - | yfjL | b2628 | 0.82 | +0.1 |
2,762,918 | + | yfjL | b2628 | 0.84 | +0.2 |
2,762,982 | + | yfjL | b2628 | 0.88 | +0.6 |
2,763,052 | - | +0.1 | |||
2,763,059 | + | -0.7 | |||
2,763,074 | - | +1.2 | |||
2,763,104 | - | +0.0 | |||
2,763,119 | + | -0.2 | |||
2,763,137 | + | +0.9 | |||
2,763,173 | + | -0.6 | |||
2,763,265 | - | -0.7 | |||
2,763,265 | - | +0.2 | |||
2,763,365 | + | +0.6 | |||
2,763,411 | + | +0.3 | |||
2,763,445 | + | -0.1 | |||
2,763,445 | + | -0.1 | |||
2,763,561 | - | +0.9 | |||
2,763,561 | - | -1.2 | |||
2,763,588 | - | yfjM | b2629 | 0.20 | +0.7 |
2,763,611 | - | yfjM | b2629 | 0.29 | -0.2 |
2,763,621 | - | yfjM | b2629 | 0.33 | +0.2 |
2,763,642 | + | yfjM | b2629 | 0.41 | -0.6 |
2,763,650 | - | yfjM | b2629 | 0.44 | -0.1 |
2,763,652 | + | yfjM | b2629 | 0.44 | -0.3 |
2,763,758 | + | yfjM | b2629 | 0.84 | -0.1 |
2,763,758 | + | yfjM | b2629 | 0.84 | -1.4 |
2,763,833 | + | -0.2 | |||
2,763,833 | + | +1.0 | |||
2,763,836 | + | +0.1 | |||
2,763,836 | + | -0.0 | |||
2,763,841 | - | +0.2 | |||
2,763,844 | - | -1.6 | |||
2,763,844 | - | +1.3 | |||
2,763,851 | + | -0.1 | |||
2,763,921 | + | +0.2 | |||
2,764,043 | + | +0.0 | |||
2,764,082 | + | yfjN | b2630 | 0.13 | -0.5 |
2,764,093 | + | yfjN | b2630 | 0.14 | +0.3 |
2,764,093 | + | yfjN | b2630 | 0.14 | -0.2 |
Or see this region's nucleotide sequence