Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS17305

Experiment: 30_an_initial_3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	30_an_initial_3
3,715,833	-		AMB_RS17295	0.76	+0.0
3,715,965	-				+0.5
3,715,988	+				-0.4
3,715,988	+				-0.8
3,715,988	+				-1.9
3,715,988	+				-0.6
3,715,988	+				-1.4
3,715,988	+				-0.2
3,715,989	-				-1.4
3,715,989	-				-1.2
3,715,989	-				+0.0
3,715,989	-				-1.4
3,715,989	-				-1.0
3,715,989	-				-0.1
3,715,989	-				-0.7
3,715,989	-				-0.6
3,716,148	+		AMB_RS17300	0.28	-1.0
3,716,149	-		AMB_RS17300	0.29	-1.9
3,716,149	-		AMB_RS17300	0.29	-1.4
3,716,149	-		AMB_RS17300	0.29	+0.2
3,716,149	-		AMB_RS17300	0.29	-2.2
3,716,208	+		AMB_RS17300	0.44	+0.5
3,716,316	+		AMB_RS17300	0.72	-1.6
3,716,316	+		AMB_RS17300	0.72	+0.0
3,716,317	-		AMB_RS17300	0.72	+0.4
3,716,317	-		AMB_RS17300	0.72	-0.9
3,716,317	-		AMB_RS17300	0.72	-0.1
3,716,317	-		AMB_RS17300	0.72	+0.4
3,716,317	-		AMB_RS17300	0.72	-3.2
3,716,317	-		AMB_RS17300	0.72	+0.2
3,716,410	+				-0.6
3,716,446	-				-0.2
3,716,457	-				-0.2
3,716,476	+				-0.1
3,716,550	+				-0.3
3,716,550	+				-0.1
3,716,551	-				+0.3
3,716,553	+				-1.2
3,716,649	+				+0.2
3,716,650	-				-0.0
3,716,650	-				-1.6
3,716,787	+		AMB_RS17305	0.15	+0.3
3,716,787	+		AMB_RS17305	0.15	+1.4
3,716,788	-		AMB_RS17305	0.15	+0.8
3,716,788	-		AMB_RS17305	0.15	+1.4
3,716,788	-		AMB_RS17305	0.15	+0.6
3,716,788	-		AMB_RS17305	0.15	+0.4
3,716,788	-		AMB_RS17305	0.15	+1.1
3,716,788	-		AMB_RS17305	0.15	+0.4
3,716,788	-		AMB_RS17305	0.15	+0.5
3,716,793	+		AMB_RS17305	0.15	-1.2
3,716,794	-		AMB_RS17305	0.15	+0.3
3,716,794	-		AMB_RS17305	0.15	-1.4
3,716,797	+		AMB_RS17305	0.16	+0.2
3,716,798	-		AMB_RS17305	0.16	+0.4
3,716,886	+		AMB_RS17305	0.21	+0.7
3,716,886	+		AMB_RS17305	0.21	+0.3
3,716,886	+		AMB_RS17305	0.21	+1.3
3,716,887	-		AMB_RS17305	0.21	-0.9
3,716,887	-		AMB_RS17305	0.21	-1.9
3,716,943	+		AMB_RS17305	0.25	+0.5
3,716,943	+		AMB_RS17305	0.25	-0.1
3,716,944	-		AMB_RS17305	0.25	-0.2
3,716,944	-		AMB_RS17305	0.25	+0.8
3,716,944	-		AMB_RS17305	0.25	-0.2
3,716,958	+		AMB_RS17305	0.26	+0.5
3,716,958	+		AMB_RS17305	0.26	-1.8
3,716,958	+		AMB_RS17305	0.26	+0.7
3,716,958	+		AMB_RS17305	0.26	+0.2
3,716,959	-		AMB_RS17305	0.26	-1.2
3,716,959	-		AMB_RS17305	0.26	+0.2
3,716,959	-		AMB_RS17305	0.26	+0.1
3,717,009	+		AMB_RS17305	0.29	+0.4
3,717,010	-		AMB_RS17305	0.29	-1.2
3,717,069	+		AMB_RS17305	0.33	-0.4
3,717,069	+		AMB_RS17305	0.33	-1.4
3,717,069	+		AMB_RS17305	0.33	+0.1
3,717,069	+		AMB_RS17305	0.33	-1.4
3,717,069	+		AMB_RS17305	0.33	+0.1
3,717,070	-		AMB_RS17305	0.33	-0.6
3,717,070	-		AMB_RS17305	0.33	+0.5
3,717,070	-		AMB_RS17305	0.33	+0.7
3,717,070	-		AMB_RS17305	0.33	+0.9
3,717,072	+		AMB_RS17305	0.33	+0.2
3,717,072	+		AMB_RS17305	0.33	-0.0
3,717,109	+		AMB_RS17305	0.36	-0.9
3,717,109	+		AMB_RS17305	0.36	-0.2
3,717,110	-		AMB_RS17305	0.36	+0.5
3,717,132	+		AMB_RS17305	0.37	-0.2
3,717,132	+		AMB_RS17305	0.37	-0.0
3,717,133	-		AMB_RS17305	0.37	-0.7
3,717,251	-		AMB_RS17305	0.45	+0.2
3,717,251	-		AMB_RS17305	0.45	-2.3
3,717,264	+		AMB_RS17305	0.45	-0.2
3,717,264	+		AMB_RS17305	0.45	+0.1
3,717,265	-		AMB_RS17305	0.45	-1.0
3,717,315	+		AMB_RS17305	0.49	-0.1
3,717,316	-		AMB_RS17305	0.49	-2.2
3,717,333	+		AMB_RS17305	0.50	-1.6
3,717,333	+		AMB_RS17305	0.50	+0.7
3,717,333	+		AMB_RS17305	0.50	+0.1
3,717,333	+		AMB_RS17305	0.50	+0.2
3,717,334	-		AMB_RS17305	0.50	+0.4
3,717,334	-		AMB_RS17305	0.50	-1.4
3,717,334	-		AMB_RS17305	0.50	-0.4
3,717,334	-		AMB_RS17305	0.50	-0.2
3,717,409	+		AMB_RS17305	0.55	+0.6
3,717,410	-		AMB_RS17305	0.55	-0.3
3,717,432	+		AMB_RS17305	0.56	-0.9
3,717,433	-		AMB_RS17305	0.56	-1.9
3,717,477	+		AMB_RS17305	0.59	+0.4
3,717,477	+		AMB_RS17305	0.59	+0.4
3,717,477	+		AMB_RS17305	0.59	+0.8
3,717,478	-		AMB_RS17305	0.59	+0.1
3,717,478	-		AMB_RS17305	0.59	-0.6
3,717,478	-		AMB_RS17305	0.59	+0.6
3,717,478	-		AMB_RS17305	0.59	+0.3
3,717,478	-		AMB_RS17305	0.59	+0.4
3,717,705	+		AMB_RS17305	0.73	-1.2
3,717,741	+		AMB_RS17305	0.76	+0.6
3,717,745	+		AMB_RS17305	0.76	-0.2
3,717,745	+		AMB_RS17305	0.76	-0.6
3,717,746	-		AMB_RS17305	0.76	-0.1
3,717,746	-		AMB_RS17305	0.76	-0.9
3,717,746	-		AMB_RS17305	0.76	+0.4
3,717,746	-		AMB_RS17305	0.76	+0.2
3,717,746	-		AMB_RS17305	0.76	-1.8
3,717,746	-		AMB_RS17305	0.76	+0.4
3,717,746	-		AMB_RS17305	0.76	-1.0
3,717,810	+		AMB_RS17305	0.80	+0.5
3,717,811	-		AMB_RS17305	0.80	+0.8
3,717,822	+		AMB_RS17305	0.81	-3.9
3,717,823	-		AMB_RS17305	0.81	-0.1
3,717,838	-		AMB_RS17305	0.82	+0.5
3,717,927	+		AMB_RS17305	0.88	+0.1
3,717,927	+		AMB_RS17305	0.88	+0.5
3,717,928	-		AMB_RS17305	0.88	+0.4
3,718,017	+				+0.2
3,718,017	+				+0.8
3,718,120	+				-0.4
3,718,121	-				-0.2
3,718,121	-				-2.2
3,718,121	-				-1.8
3,718,257	-				+0.1
3,718,298	+				+0.3
3,718,299	-				-0.9
3,718,453	+				+0.5
3,718,477	+				-0.5
3,718,478	-				+0.2
3,718,478	-				-1.2
3,718,486	+				-0.1
3,718,486	+				-0.8
3,718,486	+				-0.9
3,718,486	+				-0.3
3,718,486	+				-2.6
3,718,486	+				-1.9
3,718,486	+				+0.2
3,718,486	+				-0.3
3,718,486	+				-0.8
3,718,486	+				-0.9
3,718,486	+				-1.2
3,718,487	-				-0.6
3,718,487	-				-0.6
3,718,487	-				+0.0
3,718,487	-				-0.7
3,718,487	-				-0.6
3,718,487	-				+0.6
3,718,831	+				+0.4
3,718,831	+				-0.4
3,718,832	-				-0.6
3,718,832	-				-2.5
3,718,849	+				-0.4
3,718,849	+				-0.1
3,718,850	-				-2.3
3,718,850	-				-3.0
3,718,906	+				-0.2
3,718,906	+				-2.3
3,718,907	-				-0.8
3,718,907	-				-2.3
3,718,929	-				-0.5
3,718,931	-				-1.4
3,718,931	-				-0.1