Strain Fitness in Escherichia coli BW25113 around b1945
Experiment: benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | benzoic 0.58 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,017,116 | + | fliK | b1943 | 0.63 | +0.2 |
2,017,182 | + | fliK | b1943 | 0.68 | -2.2 |
2,017,207 | + | fliK | b1943 | 0.71 | -0.2 |
2,017,207 | + | fliK | b1943 | 0.71 | +0.6 |
2,017,267 | + | fliK | b1943 | 0.76 | -0.3 |
2,017,323 | + | fliK | b1943 | 0.81 | -2.1 |
2,017,488 | + | +0.8 | |||
2,017,757 | + | fliL | b1944 | 0.25 | +0.6 |
2,017,757 | + | fliL | b1944 | 0.25 | +0.1 |
2,017,797 | - | fliL | b1944 | 0.33 | +0.8 |
2,017,813 | + | fliL | b1944 | 0.37 | +0.8 |
2,017,947 | - | fliL | b1944 | 0.66 | -0.1 |
2,017,972 | + | fliL | b1944 | 0.71 | +1.2 |
2,018,029 | - | fliL | b1944 | 0.83 | +2.9 |
2,018,038 | - | fliL | b1944 | 0.85 | +0.3 |
2,018,038 | - | fliL | b1944 | 0.85 | -0.1 |
2,018,299 | + | fliM | b1945 | 0.19 | +0.8 |
2,018,411 | + | fliM | b1945 | 0.30 | +0.3 |
2,018,420 | - | fliM | b1945 | 0.31 | -0.2 |
2,018,466 | + | fliM | b1945 | 0.35 | +0.8 |
2,018,466 | + | fliM | b1945 | 0.35 | +2.1 |
2,018,608 | - | fliM | b1945 | 0.49 | +1.4 |
2,018,608 | - | fliM | b1945 | 0.49 | -0.4 |
2,018,610 | - | fliM | b1945 | 0.50 | -1.0 |
2,018,610 | - | fliM | b1945 | 0.50 | +0.4 |
2,018,652 | - | fliM | b1945 | 0.54 | +0.6 |
2,018,689 | - | fliM | b1945 | 0.58 | +1.6 |
2,018,689 | - | fliM | b1945 | 0.58 | -0.7 |
2,018,700 | + | fliM | b1945 | 0.59 | -0.1 |
2,018,870 | + | fliM | b1945 | 0.76 | +0.6 |
2,018,875 | + | fliM | b1945 | 0.76 | +1.0 |
2,018,890 | - | fliM | b1945 | 0.78 | +1.1 |
2,019,025 | + | -0.5 | |||
2,019,106 | + | -1.0 | |||
2,019,397 | + | fliN | b1946 | 0.69 | +0.3 |
2,019,437 | + | fliN | b1946 | 0.79 | +0.3 |
2,019,538 | + | +1.0 | |||
2,019,538 | + | +0.2 | |||
2,019,995 | + | fliP | b1948 | 0.14 | -0.4 |
2,020,000 | + | fliP | b1948 | 0.14 | +0.1 |
Or see this region's nucleotide sequence