Strain Fitness in Pseudomonas sp. RS175 around PFR28_01836

Experiment: Choline (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Choline (C) 10 mM
2,058,307	-		PFR28_01835	0.29	+0.1
2,058,470	-		PFR28_01835	0.41	-2.7
2,058,476	+		PFR28_01835	0.41	+1.0
2,058,477	-		PFR28_01835	0.42	+0.3
2,058,483	+		PFR28_01835	0.42	-0.6
2,058,483	+		PFR28_01835	0.42	-1.1
2,058,484	-		PFR28_01835	0.42	+0.9
2,058,484	-		PFR28_01835	0.42	+0.9
2,058,484	-		PFR28_01835	0.42	+1.3
2,058,485	+		PFR28_01835	0.42	-2.1
2,058,519	+		PFR28_01835	0.45	+0.4
2,058,519	+		PFR28_01835	0.45	-0.2
2,058,520	-		PFR28_01835	0.45	-1.5
2,058,520	-		PFR28_01835	0.45	+0.6
2,058,603	+		PFR28_01835	0.51	-2.2
2,058,603	+		PFR28_01835	0.51	-1.8
2,058,636	+		PFR28_01835	0.54	-0.6
2,058,636	+		PFR28_01835	0.54	-0.7
2,058,689	+		PFR28_01835	0.58	-1.0
2,058,689	+		PFR28_01835	0.58	+0.5
2,058,689	+		PFR28_01835	0.58	+0.3
2,058,690	-		PFR28_01835	0.58	+0.3
2,058,690	-		PFR28_01835	0.58	-2.3
2,058,840	+		PFR28_01835	0.69	-1.3
2,058,840	+		PFR28_01835	0.69	+0.8
2,058,840	+		PFR28_01835	0.69	+0.1
2,058,840	+		PFR28_01835	0.69	-0.3
2,058,841	-		PFR28_01835	0.69	-1.1
2,058,841	-		PFR28_01835	0.69	+0.1
2,058,841	-		PFR28_01835	0.69	-0.2
2,058,841	-		PFR28_01835	0.69	+1.2
2,058,841	-		PFR28_01835	0.69	+0.7
2,058,841	-		PFR28_01835	0.69	-0.0
2,058,841	-		PFR28_01835	0.69	-0.5
2,058,841	-		PFR28_01835	0.69	-1.5
2,058,841	-		PFR28_01835	0.69	-1.4
2,058,841	-		PFR28_01835	0.69	-1.5
2,058,842	+		PFR28_01835	0.69	+0.4
2,058,842	+		PFR28_01835	0.69	-0.0
2,058,842	+		PFR28_01835	0.69	+0.5
2,058,842	+		PFR28_01835	0.69	+0.6
2,058,842	+		PFR28_01835	0.69	-0.6
2,058,842	+		PFR28_01835	0.69	-1.0
2,058,842	+		PFR28_01835	0.69	+1.9
2,058,842	+		PFR28_01835	0.69	+0.1
2,058,842	+		PFR28_01835	0.69	+0.2
2,058,842	+		PFR28_01835	0.69	+1.6
2,058,842	+		PFR28_01835	0.69	+1.4
2,058,842	+		PFR28_01835	0.69	+0.9
2,058,842	+		PFR28_01835	0.69	+0.2
2,058,842	+		PFR28_01835	0.69	+0.0
2,058,842	+		PFR28_01835	0.69	+0.8
2,058,842	+		PFR28_01835	0.69	-0.3
2,058,842	+		PFR28_01835	0.69	+0.8
2,058,842	+		PFR28_01835	0.69	-1.8
2,058,843	-		PFR28_01835	0.69	-1.3
2,058,843	-		PFR28_01835	0.69	+0.3
2,058,843	-		PFR28_01835	0.69	-1.4
2,058,843	-		PFR28_01835	0.69	-1.4
2,058,843	-		PFR28_01835	0.69	+0.3
2,058,843	-		PFR28_01835	0.69	+0.8
2,058,843	-		PFR28_01835	0.69	+0.2
2,058,843	-		PFR28_01835	0.69	+0.5
2,058,843	-		PFR28_01835	0.69	-0.2
2,058,843	-		PFR28_01835	0.69	+0.3
2,058,843	-		PFR28_01835	0.69	+0.3
2,058,843	-		PFR28_01835	0.69	-0.3
2,058,843	-		PFR28_01835	0.69	+1.6
2,058,843	-		PFR28_01835	0.69	+1.3
2,058,843	-		PFR28_01835	0.69	+1.4
2,058,843	-		PFR28_01835	0.69	+0.6
2,058,843	-		PFR28_01835	0.69	-0.9
2,058,843	-		PFR28_01835	0.69	+0.8
2,058,873	+		PFR28_01835	0.72	-0.7
2,058,873	+		PFR28_01835	0.72	-0.6
2,058,873	+		PFR28_01835	0.72	+0.5
2,058,873	+		PFR28_01835	0.72	+1.7
2,058,873	+		PFR28_01835	0.72	+0.5
2,058,873	+		PFR28_01835	0.72	-0.0
2,058,873	+		PFR28_01835	0.72	+1.5
2,058,873	+		PFR28_01835	0.72	-0.1
2,058,873	+		PFR28_01835	0.72	+0.2
2,058,873	+		PFR28_01835	0.72	+1.1
2,058,873	+		PFR28_01835	0.72	+0.1
2,058,873	+		PFR28_01835	0.72	+0.7
2,058,874	-		PFR28_01835	0.72	-1.5
2,058,874	-		PFR28_01835	0.72	-0.6
2,058,874	-		PFR28_01835	0.72	+0.2
2,058,874	-		PFR28_01835	0.72	+0.5
2,058,874	-		PFR28_01835	0.72	-0.5
2,058,874	-		PFR28_01835	0.72	+0.2
2,058,874	-		PFR28_01835	0.72	-1.2
2,058,874	-		PFR28_01835	0.72	-1.5
2,058,874	-		PFR28_01835	0.72	+0.2
2,058,874	-		PFR28_01835	0.72	+0.3
2,058,874	-		PFR28_01835	0.72	+0.2
2,058,970	-		PFR28_01835	0.79	+0.1
2,058,985	+		PFR28_01835	0.80	+0.1
2,058,986	-		PFR28_01835	0.80	+1.1
2,058,986	-		PFR28_01835	0.80	-3.3
2,058,986	-		PFR28_01835	0.80	-0.4
2,059,017	+		PFR28_01835	0.83	+0.1
2,059,017	+		PFR28_01835	0.83	-1.1
2,059,017	+		PFR28_01835	0.83	+0.4
2,059,017	+		PFR28_01835	0.83	-0.1
2,059,050	+		PFR28_01835	0.85	-0.3
2,059,050	+		PFR28_01835	0.85	+0.1
2,059,050	+		PFR28_01835	0.85	+0.2
2,059,098	+		PFR28_01835	0.89	-0.7
2,059,098	+		PFR28_01835	0.89	-0.6
2,059,098	+		PFR28_01835	0.89	+0.1
2,059,099	-		PFR28_01835	0.89	+1.3
2,059,099	-		PFR28_01835	0.89	-0.1
2,059,156	-				+0.3
2,059,221	+				-0.9
2,059,221	+				-0.7
2,059,222	-				-0.6
2,059,222	-				-0.6
2,059,222	-				+0.5
2,059,304	+				+0.9
2,059,304	+				+0.2
2,059,305	-				+0.8
2,059,305	-				-0.0
2,059,442	+		PFR28_01836	0.30	-1.2
2,059,443	-		PFR28_01836	0.30	-0.9
2,059,443	-		PFR28_01836	0.30	-0.3
2,059,443	-		PFR28_01836	0.30	-1.5
2,059,906	-				+0.6
2,060,005	+				+0.9
2,060,005	+				-1.8
2,060,006	-				-0.4
2,060,006	-				+1.0
2,060,162	+		PFR28_01837	0.20	+0.5
2,060,218	+		PFR28_01837	0.27	+0.1
2,060,219	-		PFR28_01837	0.27	+1.0
2,060,308	+		PFR28_01837	0.38	-2.4
2,060,308	+		PFR28_01837	0.38	+0.9
2,060,308	+		PFR28_01837	0.38	-0.4
2,060,309	-		PFR28_01837	0.38	+1.1
2,060,309	-		PFR28_01837	0.38	-0.7
2,060,309	-		PFR28_01837	0.38	-0.1
2,060,309	-		PFR28_01837	0.38	-2.6
2,060,309	-		PFR28_01837	0.38	-0.6
2,060,406	+		PFR28_01837	0.49	-0.9
2,060,407	-		PFR28_01837	0.49	+1.0
2,060,500	+		PFR28_01837	0.61	-2.5
2,060,500	+		PFR28_01837	0.61	+2.0
2,060,501	-		PFR28_01837	0.61	-0.3
2,060,501	-		PFR28_01837	0.61	+0.3
2,060,501	-		PFR28_01837	0.61	+1.0
2,060,503	+		PFR28_01837	0.61	-0.7
2,060,503	+		PFR28_01837	0.61	+0.6
2,060,503	+		PFR28_01837	0.61	+0.4
2,060,503	+		PFR28_01837	0.61	+1.2
2,060,503	+		PFR28_01837	0.61	+0.1
2,060,503	+		PFR28_01837	0.61	-1.2
2,060,503	+		PFR28_01837	0.61	-0.5
2,060,503	+		PFR28_01837	0.61	-0.9
2,060,503	+		PFR28_01837	0.61	-0.3
2,060,503	+		PFR28_01837	0.61	-1.1
2,060,503	+		PFR28_01837	0.61	+0.4
2,060,503	+		PFR28_01837	0.61	-2.9
2,060,503	+		PFR28_01837	0.61	+0.9
2,060,503	+		PFR28_01837	0.61	-1.7
2,060,503	+		PFR28_01837	0.61	+0.0
2,060,503	+		PFR28_01837	0.61	-1.1
2,060,504	-		PFR28_01837	0.61	+0.8
2,060,504	-		PFR28_01837	0.61	-0.7
2,060,504	-		PFR28_01837	0.61	+0.4
2,060,704	+		PFR28_01837	0.85	-0.1
2,060,704	+		PFR28_01837	0.85	-0.9
2,060,704	+		PFR28_01837	0.85	-0.2
2,060,704	+		PFR28_01837	0.85	-3.3
2,060,705	-		PFR28_01837	0.85	-0.3
2,060,705	-		PFR28_01837	0.85	+0.0
2,060,705	-		PFR28_01837	0.85	-0.4
2,060,705	-		PFR28_01837	0.85	+0.4
2,060,705	-		PFR28_01837	0.85	+0.2
2,060,710	+		PFR28_01837	0.86	-0.0
2,060,710	+		PFR28_01837	0.86	-2.4
2,060,710	+		PFR28_01837	0.86	+0.4