Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yieE and yieF are separated by 21 nucleotides yieF and yieG are separated by 53 nucleotides yieG and yieH are separated by 164 nucleotides yieH and yieI are separated by 66 nucleotides
b3712: yieE - predicted phosphopantetheinyl transferase (RefSeq), at 3,891,904 to 3,892,653
yieE
b3713: yieF - chromate reductase, Class I, flavoprotein (NCBI), at 3,892,675 to 3,893,241
yieF
b3714: yieG - predicted inner membrane protein (NCBI), at 3,893,295 to 3,894,632
yieG
b3715: yieH - predicted hydrolase (NCBI), at 3,894,797 to 3,895,462
yieH
b3716: yieI - predicted inner membrane protein (NCBI), at 3,895,529 to 3,895,996
yieI
Position (kb)
3893
3894
3895 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3892.310 kb on + strand, within yieE at 3892.332 kb on + strand, within yieE at 3892.342 kb on - strand, within yieE at 3892.352 kb on - strand, within yieE at 3892.352 kb on - strand, within yieE at 3892.405 kb on - strand, within yieE at 3892.477 kb on + strand, within yieE at 3892.482 kb on + strand, within yieE at 3892.488 kb on - strand, within yieE at 3892.490 kb on - strand, within yieE at 3892.490 kb on - strand, within yieE at 3892.508 kb on + strand, within yieE at 3892.508 kb on + strand, within yieE at 3892.525 kb on + strand, within yieE at 3892.548 kb on + strand, within yieE at 3892.613 kb on + strand at 3892.613 kb on + strand at 3892.615 kb on + strand at 3892.615 kb on + strand at 3892.669 kb on - strand at 3892.694 kb on + strand at 3892.694 kb on + strand at 3892.697 kb on + strand at 3892.697 kb on + strand at 3892.712 kb on + strand at 3892.712 kb on + strand at 3892.731 kb on - strand at 3892.741 kb on + strand, within yieF at 3892.744 kb on + strand, within yieF at 3892.744 kb on + strand, within yieF at 3892.753 kb on - strand, within yieF at 3892.753 kb on - strand, within yieF at 3892.753 kb on - strand, within yieF at 3892.800 kb on - strand, within yieF at 3892.813 kb on + strand, within yieF at 3892.870 kb on + strand, within yieF at 3892.870 kb on + strand, within yieF at 3892.903 kb on - strand, within yieF at 3892.903 kb on - strand, within yieF at 3892.908 kb on - strand, within yieF at 3892.933 kb on + strand, within yieF at 3892.933 kb on + strand, within yieF at 3892.933 kb on + strand, within yieF at 3892.933 kb on + strand, within yieF at 3892.933 kb on + strand, within yieF at 3892.941 kb on - strand, within yieF at 3892.975 kb on - strand, within yieF at 3892.994 kb on - strand, within yieF at 3893.087 kb on + strand, within yieF at 3893.087 kb on + strand, within yieF at 3893.097 kb on + strand, within yieF at 3893.097 kb on + strand, within yieF at 3893.103 kb on - strand, within yieF at 3893.153 kb on + strand, within yieF at 3893.161 kb on - strand, within yieF at 3893.172 kb on + strand, within yieF at 3893.172 kb on + strand, within yieF at 3893.172 kb on + strand, within yieF at 3893.172 kb on + strand, within yieF at 3893.172 kb on + strand, within yieF at 3893.172 kb on + strand, within yieF at 3893.180 kb on - strand, within yieF at 3893.180 kb on - strand, within yieF at 3893.180 kb on - strand, within yieF at 3893.180 kb on - strand, within yieF at 3893.294 kb on - strand at 3893.325 kb on - strand at 3893.325 kb on - strand at 3893.336 kb on - strand at 3893.336 kb on - strand at 3893.343 kb on + strand at 3893.357 kb on + strand at 3893.357 kb on + strand at 3893.357 kb on + strand at 3893.357 kb on + strand at 3893.357 kb on + strand at 3893.363 kb on + strand at 3893.365 kb on - strand at 3893.365 kb on - strand at 3893.380 kb on + strand at 3893.380 kb on + strand at 3893.400 kb on + strand at 3893.400 kb on + strand at 3893.406 kb on + strand at 3893.406 kb on + strand at 3893.408 kb on - strand at 3893.482 kb on + strand, within yieG at 3893.493 kb on + strand, within yieG at 3893.493 kb on + strand, within yieG at 3893.496 kb on - strand, within yieG at 3893.510 kb on - strand, within yieG at 3893.510 kb on - strand, within yieG at 3893.552 kb on - strand, within yieG at 3893.568 kb on + strand, within yieG at 3893.576 kb on - strand, within yieG at 3893.576 kb on - strand, within yieG at 3893.726 kb on + strand, within yieG at 3893.734 kb on - strand, within yieG at 3893.734 kb on - strand, within yieG at 3893.739 kb on - strand, within yieG at 3893.778 kb on + strand, within yieG at 3893.881 kb on + strand, within yieG at 3893.934 kb on - strand, within yieG at 3893.934 kb on - strand, within yieG at 3893.960 kb on - strand, within yieG at 3893.967 kb on + strand, within yieG at 3893.968 kb on - strand, within yieG at 3893.968 kb on - strand, within yieG at 3893.979 kb on + strand, within yieG at 3893.979 kb on + strand, within yieG at 3893.982 kb on - strand, within yieG at 3894.006 kb on + strand, within yieG at 3894.009 kb on + strand, within yieG at 3894.041 kb on + strand, within yieG at 3894.049 kb on - strand, within yieG at 3894.080 kb on - strand, within yieG at 3894.080 kb on - strand, within yieG at 3894.094 kb on + strand, within yieG at 3894.134 kb on - strand, within yieG at 3894.135 kb on - strand, within yieG at 3894.168 kb on + strand, within yieG at 3894.168 kb on - strand, within yieG at 3894.168 kb on - strand, within yieG at 3894.171 kb on - strand, within yieG at 3894.197 kb on + strand, within yieG at 3894.205 kb on - strand, within yieG at 3894.226 kb on + strand, within yieG at 3894.274 kb on + strand, within yieG at 3894.348 kb on + strand, within yieG at 3894.348 kb on + strand, within yieG at 3894.377 kb on - strand, within yieG at 3894.399 kb on + strand, within yieG at 3894.399 kb on + strand, within yieG at 3894.401 kb on + strand, within yieG at 3894.409 kb on - strand, within yieG at 3894.423 kb on + strand, within yieG at 3894.424 kb on + strand, within yieG at 3894.430 kb on - strand, within yieG at 3894.451 kb on + strand, within yieG at 3894.451 kb on + strand, within yieG at 3894.464 kb on - strand, within yieG at 3894.521 kb on + strand at 3894.548 kb on + strand at 3894.548 kb on + strand at 3894.553 kb on + strand at 3894.553 kb on + strand at 3894.566 kb on - strand at 3894.566 kb on - strand at 3894.602 kb on - strand at 3894.620 kb on + strand at 3894.628 kb on - strand at 3894.657 kb on - strand at 3894.770 kb on + strand at 3894.841 kb on + strand at 3894.874 kb on - strand, within yieH at 3894.917 kb on - strand, within yieH at 3894.939 kb on + strand, within yieH at 3894.939 kb on + strand, within yieH at 3894.978 kb on + strand, within yieH at 3894.978 kb on + strand, within yieH at 3895.023 kb on + strand, within yieH at 3895.031 kb on - strand, within yieH at 3895.062 kb on - strand, within yieH at 3895.069 kb on - strand, within yieH at 3895.080 kb on - strand, within yieH at 3895.090 kb on + strand, within yieH at 3895.098 kb on - strand, within yieH at 3895.110 kb on + strand, within yieH at 3895.186 kb on - strand, within yieH at 3895.186 kb on - strand, within yieH at 3895.190 kb on - strand, within yieH at 3895.206 kb on + strand, within yieH at 3895.230 kb on - strand, within yieH at 3895.230 kb on - strand, within yieH at 3895.243 kb on - strand, within yieH at 3895.243 kb on - strand, within yieH at 3895.348 kb on + strand, within yieH at 3895.348 kb on - strand, within yieH at 3895.348 kb on - strand, within yieH at 3895.366 kb on + strand, within yieH at 3895.405 kb on - strand at 3895.406 kb on - strand at 3895.419 kb on + strand at 3895.427 kb on - strand at 3895.427 kb on - strand at 3895.427 kb on - strand at 3895.427 kb on - strand at 3895.428 kb on + strand at 3895.462 kb on + strand at 3895.462 kb on + strand at 3895.470 kb on - strand at 3895.470 kb on - strand at 3895.470 kb on - strand at 3895.470 kb on - strand at 3895.474 kb on + strand at 3895.474 kb on + strand at 3895.479 kb on + strand at 3895.482 kb on - strand at 3895.482 kb on - strand at 3895.483 kb on - strand at 3895.483 kb on - strand at 3895.508 kb on + strand at 3895.525 kb on + strand at 3895.530 kb on + strand at 3895.530 kb on + strand at 3895.531 kb on + strand at 3895.531 kb on + strand at 3895.533 kb on - strand at 3895.535 kb on + strand at 3895.535 kb on + strand at 3895.535 kb on - strand at 3895.597 kb on + strand, within yieI at 3895.608 kb on - strand, within yieI at 3895.631 kb on - strand, within yieI
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 3,892,310 + yieE b3712 0.54 +0.2 3,892,332 + yieE b3712 0.57 +1.2 3,892,342 - yieE b3712 0.58 -1.4 3,892,352 - yieE b3712 0.60 -2.4 3,892,352 - yieE b3712 0.60 +2.2 3,892,405 - yieE b3712 0.67 +0.6 3,892,477 + yieE b3712 0.76 -0.0 3,892,482 + yieE b3712 0.77 -2.1 3,892,488 - yieE b3712 0.78 -0.2 3,892,490 - yieE b3712 0.78 +2.7 3,892,490 - yieE b3712 0.78 +0.4 3,892,508 + yieE b3712 0.81 +0.5 3,892,508 + yieE b3712 0.81 +1.5 3,892,525 + yieE b3712 0.83 -0.9 3,892,548 + yieE b3712 0.86 -0.9 3,892,613 + -0.9 3,892,613 + +0.7 3,892,615 + +0.7 3,892,615 + +0.4 3,892,669 - +1.6 3,892,694 + +1.1 3,892,694 + +1.7 3,892,697 + -1.1 3,892,697 + -0.0 3,892,712 + -0.3 3,892,712 + +0.1 3,892,731 - +1.7 3,892,741 + yieF b3713 0.12 -0.7 3,892,744 + yieF b3713 0.12 +0.7 3,892,744 + yieF b3713 0.12 +1.1 3,892,753 - yieF b3713 0.14 -0.3 3,892,753 - yieF b3713 0.14 -0.3 3,892,753 - yieF b3713 0.14 +0.7 3,892,800 - yieF b3713 0.22 -1.6 3,892,813 + yieF b3713 0.24 -2.3 3,892,870 + yieF b3713 0.34 -0.9 3,892,870 + yieF b3713 0.34 +1.7 3,892,903 - yieF b3713 0.40 +1.7 3,892,903 - yieF b3713 0.40 -0.1 3,892,908 - yieF b3713 0.41 -0.3 3,892,933 + yieF b3713 0.46 -1.4 3,892,933 + yieF b3713 0.46 -0.1 3,892,933 + yieF b3713 0.46 -1.4 3,892,933 + yieF b3713 0.46 +0.9 3,892,933 + yieF b3713 0.46 -0.6 3,892,941 - yieF b3713 0.47 -2.0 3,892,975 - yieF b3713 0.53 +1.7 3,892,994 - yieF b3713 0.56 -0.1 3,893,087 + yieF b3713 0.73 +2.1 3,893,087 + yieF b3713 0.73 +1.1 3,893,097 + yieF b3713 0.74 -1.6 3,893,097 + yieF b3713 0.74 -1.0 3,893,103 - yieF b3713 0.75 -1.9 3,893,153 + yieF b3713 0.84 -1.0 3,893,161 - yieF b3713 0.86 -0.9 3,893,172 + yieF b3713 0.88 -1.7 3,893,172 + yieF b3713 0.88 +0.4 3,893,172 + yieF b3713 0.88 +0.7 3,893,172 + yieF b3713 0.88 +0.3 3,893,172 + yieF b3713 0.88 -0.4 3,893,172 + yieF b3713 0.88 +1.1 3,893,180 - yieF b3713 0.89 +0.8 3,893,180 - yieF b3713 0.89 +1.5 3,893,180 - yieF b3713 0.89 +1.3 3,893,180 - yieF b3713 0.89 -1.7 3,893,294 - +2.3 3,893,325 - +0.7 3,893,325 - +1.9 3,893,336 - +0.4 3,893,336 - +0.2 3,893,343 + +1.3 3,893,357 + -0.9 3,893,357 + +0.2 3,893,357 + +0.6 3,893,357 + -0.3 3,893,357 + -1.1 3,893,363 + +0.3 3,893,365 - +0.7 3,893,365 - -0.9 3,893,380 + +0.1 3,893,380 + -2.7 3,893,400 + -0.0 3,893,400 + -0.6 3,893,406 + +1.3 3,893,406 + +1.7 3,893,408 - -0.3 3,893,482 + yieG b3714 0.14 -1.3 3,893,493 + yieG b3714 0.15 -0.7 3,893,493 + yieG b3714 0.15 -1.1 3,893,496 - yieG b3714 0.15 -2.4 3,893,510 - yieG b3714 0.16 -0.6 3,893,510 - yieG b3714 0.16 +1.2 3,893,552 - yieG b3714 0.19 -2.0 3,893,568 + yieG b3714 0.20 +0.3 3,893,576 - yieG b3714 0.21 -1.6 3,893,576 - yieG b3714 0.21 -0.1 3,893,726 + yieG b3714 0.32 -2.6 3,893,734 - yieG b3714 0.33 -0.6 3,893,734 - yieG b3714 0.33 -3.0 3,893,739 - yieG b3714 0.33 -1.6 3,893,778 + yieG b3714 0.36 -0.6 3,893,881 + yieG b3714 0.44 +0.5 3,893,934 - yieG b3714 0.48 +0.9 3,893,934 - yieG b3714 0.48 -0.8 3,893,960 - yieG b3714 0.50 -1.1 3,893,967 + yieG b3714 0.50 +1.7 3,893,968 - yieG b3714 0.50 +0.7 3,893,968 - yieG b3714 0.50 +0.7 3,893,979 + yieG b3714 0.51 +0.6 3,893,979 + yieG b3714 0.51 +1.7 3,893,982 - yieG b3714 0.51 -0.4 3,894,006 + yieG b3714 0.53 -0.3 3,894,009 + yieG b3714 0.53 +0.4 3,894,041 + yieG b3714 0.56 +1.3 3,894,049 - yieG b3714 0.56 -1.3 3,894,080 - yieG b3714 0.59 +1.3 3,894,080 - yieG b3714 0.59 -0.9 3,894,094 + yieG b3714 0.60 +0.7 3,894,134 - yieG b3714 0.63 +0.7 3,894,135 - yieG b3714 0.63 -0.2 3,894,168 + yieG b3714 0.65 -2.2 3,894,168 - yieG b3714 0.65 +1.1 3,894,168 - yieG b3714 0.65 -0.9 3,894,171 - yieG b3714 0.65 -1.1 3,894,197 + yieG b3714 0.67 -0.0 3,894,205 - yieG b3714 0.68 +1.1 3,894,226 + yieG b3714 0.70 +1.7 3,894,274 + yieG b3714 0.73 -0.4 3,894,348 + yieG b3714 0.79 -0.5 3,894,348 + yieG b3714 0.79 -0.3 3,894,377 - yieG b3714 0.81 -1.5 3,894,399 + yieG b3714 0.83 -0.9 3,894,399 + yieG b3714 0.83 +1.7 3,894,401 + yieG b3714 0.83 -0.0 3,894,409 - yieG b3714 0.83 -0.0 3,894,423 + yieG b3714 0.84 +2.1 3,894,424 + yieG b3714 0.84 -1.3 3,894,430 - yieG b3714 0.85 +0.9 3,894,451 + yieG b3714 0.86 -1.6 3,894,451 + yieG b3714 0.86 +0.9 3,894,464 - yieG b3714 0.87 -2.4 3,894,521 + +0.9 3,894,548 + +1.3 3,894,548 + -1.6 3,894,553 + -2.8 3,894,553 + +0.0 3,894,566 - -0.6 3,894,566 - -0.6 3,894,602 - +2.9 3,894,620 + +0.6 3,894,628 - +0.1 3,894,657 - -0.8 3,894,770 + +0.3 3,894,841 + +0.6 3,894,874 - yieH b3715 0.12 +0.7 3,894,917 - yieH b3715 0.18 -1.0 3,894,939 + yieH b3715 0.21 +0.4 3,894,939 + yieH b3715 0.21 -0.6 3,894,978 + yieH b3715 0.27 +1.2 3,894,978 + yieH b3715 0.27 +0.2 3,895,023 + yieH b3715 0.34 -0.1 3,895,031 - yieH b3715 0.35 -0.1 3,895,062 - yieH b3715 0.40 +1.7 3,895,069 - yieH b3715 0.41 +0.1 3,895,080 - yieH b3715 0.42 +0.5 3,895,090 + yieH b3715 0.44 +1.4 3,895,098 - yieH b3715 0.45 +0.3 3,895,110 + yieH b3715 0.47 -1.7 3,895,186 - yieH b3715 0.58 +0.4 3,895,186 - yieH b3715 0.58 -0.3 3,895,190 - yieH b3715 0.59 -1.8 3,895,206 + yieH b3715 0.61 -1.3 3,895,230 - yieH b3715 0.65 -0.7 3,895,230 - yieH b3715 0.65 -1.3 3,895,243 - yieH b3715 0.67 -1.3 3,895,243 - yieH b3715 0.67 +1.4 3,895,348 + yieH b3715 0.83 +1.2 3,895,348 - yieH b3715 0.83 +0.3 3,895,348 - yieH b3715 0.83 -0.1 3,895,366 + yieH b3715 0.85 +1.0 3,895,405 - -1.3 3,895,406 - +1.4 3,895,419 + +0.2 3,895,427 - -2.0 3,895,427 - -1.8 3,895,427 - +1.9 3,895,427 - +0.0 3,895,428 + -0.0 3,895,462 + +0.4 3,895,462 + +0.6 3,895,470 - -0.6 3,895,470 - +0.6 3,895,470 - -1.9 3,895,470 - -1.3 3,895,474 + +2.2 3,895,474 + -1.0 3,895,479 + -0.8 3,895,482 - -0.3 3,895,482 - +3.3 3,895,483 - +1.7 3,895,483 - -1.1 3,895,508 + +0.8 3,895,525 + -1.5 3,895,530 + -1.8 3,895,530 + -0.7 3,895,531 + +0.6 3,895,531 + +2.3 3,895,533 - -0.8 3,895,535 + +0.5 3,895,535 + -0.6 3,895,535 - -0.3 3,895,597 + yieI b3716 0.15 +1.4 3,895,608 - yieI b3716 0.17 +0.1 3,895,631 - yieI b3716 0.22 -0.0
Or see this region's nucleotide sequence