Strain Fitness in Escherichia coli BW25113 around b3674

Experiment: Aluminum chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aluminum chloride 5 mM
3,852,204	+	emrD	b3673	0.22	+0.6
3,852,244	-	emrD	b3673	0.25	-2.7
3,852,265	+	emrD	b3673	0.27	+1.9
3,852,285	+	emrD	b3673	0.29	+1.0
3,852,285	+	emrD	b3673	0.29	+0.9
3,852,287	+	emrD	b3673	0.29	+1.2
3,852,287	+	emrD	b3673	0.29	-0.9
3,852,337	-	emrD	b3673	0.33	+0.6
3,852,341	+	emrD	b3673	0.33	-2.6
3,852,350	-	emrD	b3673	0.34	+0.1
3,852,350	-	emrD	b3673	0.34	-1.0
3,852,406	+	emrD	b3673	0.39	-0.8
3,852,414	+	emrD	b3673	0.40	+1.0
3,852,414	-	emrD	b3673	0.40	+1.5
3,852,535	-	emrD	b3673	0.50	-0.5
3,852,600	-	emrD	b3673	0.55	-1.6
3,852,609	+	emrD	b3673	0.56	-0.9
3,852,609	+	emrD	b3673	0.56	+0.7
3,852,630	+	emrD	b3673	0.58	-1.0
3,852,643	+	emrD	b3673	0.59	-0.2
3,852,646	-	emrD	b3673	0.59	-0.2
3,852,653	+	emrD	b3673	0.60	-2.2
3,852,653	+	emrD	b3673	0.60	-0.2
3,852,661	-	emrD	b3673	0.60	-1.1
3,852,661	-	emrD	b3673	0.60	-0.6
3,852,662	-	emrD	b3673	0.61	-2.6
3,852,662	-	emrD	b3673	0.61	+0.1
3,852,662	-	emrD	b3673	0.61	-1.1
3,852,662	-	emrD	b3673	0.61	-2.7
3,852,662	-	emrD	b3673	0.61	+1.0
3,852,662	-	emrD	b3673	0.61	-0.1
3,852,662	-	emrD	b3673	0.61	+0.0
3,852,662	-	emrD	b3673	0.61	-1.8
3,852,666	+	emrD	b3673	0.61	-0.9
3,852,666	+	emrD	b3673	0.61	-0.8
3,852,666	+	emrD	b3673	0.61	-0.9
3,852,666	+	emrD	b3673	0.61	-1.5
3,852,669	+	emrD	b3673	0.61	-1.1
3,852,675	-	emrD	b3673	0.62	-0.2
3,852,743	+	emrD	b3673	0.67	+1.0
3,852,762	-	emrD	b3673	0.69	-0.6
3,852,762	-	emrD	b3673	0.69	-0.7
3,852,813	-	emrD	b3673	0.73	+1.4
3,852,839	+	emrD	b3673	0.75	-0.3
3,852,839	+	emrD	b3673	0.75	-0.3
3,852,900	-	emrD	b3673	0.81	-1.6
3,852,900	-	emrD	b3673	0.81	+1.8
3,852,966	-	emrD	b3673	0.86	-0.2
3,852,976	-	emrD	b3673	0.87	-0.9
3,852,981	+	emrD	b3673	0.87	-0.9
3,853,003	-	emrD	b3673	0.89	-0.6
3,853,023	-				+0.8
3,853,025	+				-1.0
3,853,035	+				-1.5
3,853,035	+				-1.0
3,853,042	-				-0.9
3,853,043	-				-2.2
3,853,043	-				+1.4
3,853,078	+				+1.0
3,853,078	+				-1.1
3,853,078	+				-1.7
3,853,086	-				-0.3
3,853,114	+				-1.1
3,853,133	+				+1.0
3,853,147	+				-1.1
3,853,147	+				+1.0
3,853,158	-				-0.3
3,853,160	+				+0.7
3,853,160	-				-0.6
3,853,160	-				+1.2
3,853,168	-				+0.7
3,853,178	+				+0.1
3,853,178	+				+1.1
3,853,216	-	yidF	b3674	0.16	-1.1
3,853,216	-	yidF	b3674	0.16	+0.4
3,853,233	+	yidF	b3674	0.19	+0.8
3,853,238	+	yidF	b3674	0.20	-1.2
3,853,257	+	yidF	b3674	0.24	+1.0
3,853,257	+	yidF	b3674	0.24	-2.3
3,853,263	-	yidF	b3674	0.25	+1.3
3,853,265	-	yidF	b3674	0.26	+0.6
3,853,284	-	yidF	b3674	0.30	+0.1
3,853,295	-	yidF	b3674	0.32	-1.2
3,853,295	-	yidF	b3674	0.32	+0.1
3,853,378	+	yidF	b3674	0.48	-1.4
3,853,390	-	yidF	b3674	0.51	-0.9
3,853,390	-	yidF	b3674	0.51	+0.1
3,853,393	+	yidF	b3674	0.51	-0.2
3,853,399	+	yidF	b3674	0.53	-0.3
3,853,399	+	yidF	b3674	0.53	-0.6
3,853,407	-	yidF	b3674	0.54	-2.6
3,853,418	-	yidF	b3674	0.56	+0.1
3,853,419	-	yidF	b3674	0.57	-0.3
3,853,419	-	yidF	b3674	0.57	-3.0
3,853,419	-	yidF	b3674	0.57	+0.5
3,853,419	-	yidF	b3674	0.57	+0.5
3,853,445	+	yidF	b3674	0.62	-0.1
3,853,445	+	yidF	b3674	0.62	-1.2
3,853,445	+	yidF	b3674	0.62	+1.3
3,853,450	+	yidF	b3674	0.63	+2.4
3,853,453	-	yidF	b3674	0.63	+0.9
3,853,453	-	yidF	b3674	0.63	+2.1
3,853,453	-	yidF	b3674	0.63	+3.0
3,853,501	+	yidF	b3674	0.73	+1.0
3,853,501	+	yidF	b3674	0.73	+1.9
3,853,506	+	yidF	b3674	0.74	+0.6
3,853,511	+	yidF	b3674	0.75	+2.7
3,853,511	+	yidF	b3674	0.75	+0.5
3,853,511	+	yidF	b3674	0.75	+1.4
3,853,597	-				-0.1
3,853,597	-				-1.3
3,853,612	+				+0.7
3,853,612	+				-0.8
3,853,666	+				-2.0
3,853,687	+	yidG	b3675	0.15	-1.9
3,853,695	+	yidG	b3675	0.18	-1.2
3,853,697	+	yidG	b3675	0.18	+0.3
3,853,703	-	yidG	b3675	0.20	-1.1
3,853,727	+	yidG	b3675	0.26	-1.3
3,853,727	+	yidG	b3675	0.26	+0.1
3,853,781	-	yidG	b3675	0.41	+0.4
3,853,781	-	yidG	b3675	0.41	-1.5
3,853,796	-	yidG	b3675	0.45	+1.1
3,853,796	-	yidG	b3675	0.45	-1.3
3,853,819	-	yidG	b3675	0.52	+0.1
3,853,869	-	yidG	b3675	0.66	-1.3
3,853,904	+	yidG	b3675	0.75	+2.4
3,853,904	+	yidG	b3675	0.75	-0.0
3,853,914	+	yidG	b3675	0.78	+0.1
3,853,919	+	yidG	b3675	0.79	-0.6
3,853,933	-	yidG	b3675	0.83	-0.3
3,853,933	-	yidG	b3675	0.83	-0.1
3,853,959	-				+1.7
3,853,959	-				+1.3
3,853,993	+				+0.4
3,854,005	-				-1.2
3,854,011	-				+0.3
3,854,011	-				+2.2
3,854,053	-	yidH	b3676	0.20	+0.9
3,854,062	+	yidH	b3676	0.23	+0.1
3,854,062	+	yidH	b3676	0.23	+0.5
3,854,062	+	yidH	b3676	0.23	-0.5
3,854,080	+	yidH	b3676	0.28	+0.7
3,854,080	+	yidH	b3676	0.28	-1.1
3,854,129	-	yidH	b3676	0.42	+2.4
3,854,214	-	yidH	b3676	0.66	+1.1
3,854,214	-	yidH	b3676	0.66	-0.3
3,854,251	-	yidH	b3676	0.77	-0.9
3,854,251	-	yidH	b3676	0.77	+0.5
3,854,305	+				+0.4
3,854,356	+				+0.3
3,854,357	+				-0.3
3,854,357	+				-0.6
3,854,445	+				+0.7
3,854,445	-				+0.4
3,854,448	-				-1.1
3,854,448	-				-1.6
3,854,450	-				-0.8
3,854,562	+	yidI	b3677	0.28	-0.3
3,854,562	+	yidI	b3677	0.28	-2.5
3,854,575	-	yidI	b3677	0.30	-0.9
3,854,595	-	yidI	b3677	0.35	-1.4