Strain Fitness in Escherichia coli BW25113 around b2800
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
2,930,137 | + | fucO | b2799 | 0.22 | +0.6 |
2,930,161 | + | fucO | b2799 | 0.24 | -0.8 |
2,930,161 | + | fucO | b2799 | 0.24 | +1.8 |
2,930,189 | - | fucO | b2799 | 0.26 | +0.4 |
2,930,198 | + | fucO | b2799 | 0.27 | +0.3 |
2,930,215 | - | fucO | b2799 | 0.29 | +2.4 |
2,930,248 | - | fucO | b2799 | 0.31 | +0.6 |
2,930,280 | + | fucO | b2799 | 0.34 | -0.8 |
2,930,288 | - | fucO | b2799 | 0.35 | +2.2 |
2,930,298 | - | fucO | b2799 | 0.36 | -0.2 |
2,930,298 | - | fucO | b2799 | 0.36 | -0.7 |
2,930,362 | + | fucO | b2799 | 0.41 | +1.3 |
2,930,367 | + | fucO | b2799 | 0.42 | -2.0 |
2,930,406 | - | fucO | b2799 | 0.45 | +0.0 |
2,930,406 | - | fucO | b2799 | 0.45 | +0.5 |
2,930,417 | + | -0.4 | |||
2,930,427 | + | fucO | b2799 | 0.47 | +0.5 |
2,930,427 | + | fucO | b2799 | 0.47 | -0.3 |
2,930,622 | - | fucO | b2799 | 0.64 | -1.5 |
2,930,660 | + | fucO | b2799 | 0.67 | -0.6 |
2,930,676 | + | fucO | b2799 | 0.69 | -0.2 |
2,930,677 | - | fucO | b2799 | 0.69 | +0.4 |
2,930,806 | - | fucO | b2799 | 0.80 | +0.4 |
2,930,806 | - | fucO | b2799 | 0.80 | -0.8 |
2,930,832 | - | fucO | b2799 | 0.82 | -0.1 |
2,930,856 | + | fucO | b2799 | 0.84 | +0.2 |
2,930,872 | - | fucO | b2799 | 0.86 | +0.2 |
2,930,877 | - | fucO | b2799 | 0.86 | -1.8 |
2,930,877 | - | fucO | b2799 | 0.86 | +0.9 |
2,930,892 | + | fucO | b2799 | 0.87 | -0.3 |
2,931,131 | + | fucA | b2800 | 0.10 | -0.7 |
2,931,172 | + | fucA | b2800 | 0.17 | -0.2 |
2,931,349 | - | fucA | b2800 | 0.44 | +1.7 |
2,931,349 | - | fucA | b2800 | 0.44 | -0.3 |
2,931,381 | + | fucA | b2800 | 0.49 | -1.7 |
2,931,435 | - | fucA | b2800 | 0.57 | -1.4 |
2,931,489 | - | fucA | b2800 | 0.66 | +0.0 |
2,931,528 | + | fucA | b2800 | 0.72 | -0.9 |
2,931,528 | + | fucA | b2800 | 0.72 | -1.9 |
2,931,549 | + | fucA | b2800 | 0.75 | +1.6 |
2,931,596 | + | fucA | b2800 | 0.82 | +0.7 |
2,931,602 | - | fucA | b2800 | 0.83 | +0.6 |
2,931,602 | - | fucA | b2800 | 0.83 | -1.2 |
2,931,606 | - | fucA | b2800 | 0.84 | -1.3 |
2,931,606 | - | fucA | b2800 | 0.84 | -0.3 |
2,931,606 | - | fucA | b2800 | 0.84 | -2.8 |
2,931,611 | + | fucA | b2800 | 0.85 | +0.6 |
2,931,611 | + | fucA | b2800 | 0.85 | +0.9 |
2,931,611 | + | fucA | b2800 | 0.85 | +0.6 |
2,931,613 | + | fucA | b2800 | 0.85 | -0.5 |
2,931,613 | + | fucA | b2800 | 0.85 | +0.9 |
2,931,621 | + | fucA | b2800 | 0.86 | +0.1 |
2,931,637 | + | fucA | b2800 | 0.89 | -0.2 |
2,931,644 | - | fucA | b2800 | 0.90 | -2.2 |
2,931,644 | - | fucA | b2800 | 0.90 | +0.1 |
2,931,645 | - | fucA | b2800 | 0.90 | +0.1 |
2,931,650 | - | +0.3 | |||
2,931,650 | - | -1.9 | |||
2,931,655 | - | -0.9 | |||
2,931,673 | + | +0.7 | |||
2,931,694 | + | -1.0 | |||
2,931,694 | + | +0.0 | |||
2,931,707 | + | +1.4 | |||
2,931,711 | + | +0.8 | |||
2,931,711 | + | -0.4 | |||
2,931,711 | - | +1.3 | |||
2,931,735 | - | -0.0 | |||
2,931,735 | - | -0.7 | |||
2,931,735 | - | +0.0 | |||
2,931,748 | - | -0.1 | |||
2,931,753 | + | +1.1 | |||
2,931,762 | + | -0.1 | |||
2,931,762 | + | -0.7 | |||
2,931,764 | + | -1.9 | |||
2,932,062 | - | -0.9 | |||
2,932,091 | - | -1.2 | |||
2,932,092 | - | -0.1 | |||
2,932,099 | - | +2.1 | |||
2,932,277 | + | -1.0 | |||
2,932,638 | - | fucP | b2801 | 0.29 | -0.0 |
2,932,652 | - | fucP | b2801 | 0.30 | -1.7 |
2,932,652 | - | fucP | b2801 | 0.30 | -0.8 |
2,932,652 | - | fucP | b2801 | 0.30 | -2.2 |
2,932,696 | - | fucP | b2801 | 0.33 | +0.5 |
Or see this region's nucleotide sequence