Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt hyfG and hyfH are separated by 9 nucleotides hyfH and hyfI overlap by 4 nucleotides hyfI and b2490 overlap by 8 nucleotides
b2487: hyfG - hydrogenase 4, subunit (NCBI), at 2,606,509 to 2,608,176
hyfG
b2488: hyfH - hydrogenase 4, Fe-S subunit (NCBI), at 2,608,186 to 2,608,731
hyfH
b2489: hyfI - hydrogenase 4, Fe-S subunit (NCBI), at 2,608,728 to 2,609,486
hyfI
b2490: b2490 - putative protein processing element (VIMSS), at 2,609,479 to 2,609,892
b2490
Position (kb)
2608
2609 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2607.199 kb on + strand, within hyfG at 2607.250 kb on + strand, within hyfG at 2607.250 kb on + strand, within hyfG at 2607.258 kb on + strand, within hyfG at 2607.260 kb on + strand, within hyfG at 2607.264 kb on + strand, within hyfG at 2607.272 kb on - strand, within hyfG at 2607.354 kb on + strand, within hyfG at 2607.362 kb on + strand, within hyfG at 2607.397 kb on - strand, within hyfG at 2607.548 kb on + strand, within hyfG at 2607.838 kb on - strand, within hyfG at 2607.879 kb on + strand, within hyfG at 2608.003 kb on - strand, within hyfG at 2608.030 kb on - strand at 2608.070 kb on - strand at 2608.089 kb on - strand at 2608.121 kb on + strand at 2608.121 kb on + strand at 2608.130 kb on - strand at 2608.223 kb on - strand at 2608.416 kb on - strand, within hyfH at 2608.416 kb on - strand, within hyfH at 2608.658 kb on - strand, within hyfH at 2608.658 kb on - strand, within hyfH at 2608.733 kb on - strand at 2608.733 kb on - strand at 2608.757 kb on - strand at 2609.013 kb on + strand, within hyfI at 2609.013 kb on + strand, within hyfI at 2609.095 kb on - strand, within hyfI at 2609.097 kb on + strand, within hyfI at 2609.290 kb on - strand, within hyfI at 2609.329 kb on + strand, within hyfI at 2609.329 kb on + strand, within hyfI at 2609.393 kb on - strand, within hyfI at 2609.393 kb on - strand, within hyfI at 2609.480 kb on + strand at 2609.482 kb on + strand at 2609.490 kb on - strand at 2609.490 kb on - strand at 2609.576 kb on - strand, within b2490 at 2609.576 kb on - strand, within b2490 at 2609.595 kb on - strand, within b2490 at 2609.671 kb on - strand, within b2490
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 2,607,199 + hyfG b2487 0.41 +0.0 2,607,250 + hyfG b2487 0.44 -1.8 2,607,250 + hyfG b2487 0.44 +0.2 2,607,258 + hyfG b2487 0.45 -0.3 2,607,260 + hyfG b2487 0.45 -1.4 2,607,264 + hyfG b2487 0.45 +1.5 2,607,272 - hyfG b2487 0.46 -1.4 2,607,354 + hyfG b2487 0.51 +1.2 2,607,362 + hyfG b2487 0.51 -1.4 2,607,397 - hyfG b2487 0.53 +0.6 2,607,548 + hyfG b2487 0.62 -0.7 2,607,838 - hyfG b2487 0.80 +0.9 2,607,879 + hyfG b2487 0.82 -2.5 2,608,003 - hyfG b2487 0.90 -2.1 2,608,030 - +2.8 2,608,070 - -0.2 2,608,089 - +1.5 2,608,121 + -2.0 2,608,121 + +1.1 2,608,130 - +3.6 2,608,223 - -1.8 2,608,416 - hyfH b2488 0.42 +0.3 2,608,416 - hyfH b2488 0.42 +1.6 2,608,658 - hyfH b2488 0.86 +1.6 2,608,658 - hyfH b2488 0.86 -2.0 2,608,733 - +2.4 2,608,733 - +3.7 2,608,757 - +0.4 2,609,013 + hyfI b2489 0.38 +1.2 2,609,013 + hyfI b2489 0.38 +0.2 2,609,095 - hyfI b2489 0.48 +1.7 2,609,097 + hyfI b2489 0.49 -1.6 2,609,290 - hyfI b2489 0.74 +0.3 2,609,329 + hyfI b2489 0.79 -0.6 2,609,329 + hyfI b2489 0.79 -0.3 2,609,393 - hyfI b2489 0.88 +1.1 2,609,393 - hyfI b2489 0.88 +0.8 2,609,480 + -0.0 2,609,482 + -1.0 2,609,490 - -0.9 2,609,490 - +2.1 2,609,576 - b2490 b2490 0.23 -1.8 2,609,576 - b2490 b2490 0.23 -1.3 2,609,595 - b2490 b2490 0.28 -1.6 2,609,671 - b2490 b2490 0.46 +1.4
Or see this region's nucleotide sequence