Strain Fitness in Escherichia coli BW25113 around b2427
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
|---|---|---|---|---|---|
| remove | |||||
| 2,542,113 | + | ucpA | b2426 | 0.33 | +0.8 |
| 2,542,215 | - | ucpA | b2426 | 0.46 | +0.1 |
| 2,542,432 | - | ucpA | b2426 | 0.73 | +3.8 |
| 2,542,661 | + | -2.6 | |||
| 2,542,661 | + | -1.7 | |||
| 2,542,748 | + | -0.0 | |||
| 2,542,796 | - | +0.7 | |||
| 2,542,833 | - | -1.1 | |||
| 2,542,833 | - | +2.7 | |||
| 2,543,173 | - | yfeT | b2427 | 0.47 | +0.1 |
| 2,543,193 | - | yfeT | b2427 | 0.49 | +0.1 |
| 2,543,230 | - | yfeT | b2427 | 0.53 | -2.9 |
| 2,543,231 | + | yfeT | b2427 | 0.53 | -0.4 |
| 2,543,231 | + | yfeT | b2427 | 0.53 | -0.5 |
| 2,543,365 | + | yfeT | b2427 | 0.69 | -1.4 |
| 2,543,365 | + | yfeT | b2427 | 0.69 | -0.2 |
| 2,543,376 | + | yfeT | b2427 | 0.70 | -0.5 |
| 2,543,410 | + | yfeT | b2427 | 0.74 | -1.0 |
| 2,543,428 | - | yfeT | b2427 | 0.76 | -0.8 |
| 2,543,648 | - | -1.0 | |||
| 2,543,683 | + | -0.0 | |||
| 2,543,880 | - | +0.3 | |||
| 2,543,935 | - | yfeU | b2428 | 0.16 | +1.1 |
| 2,544,000 | + | yfeU | b2428 | 0.23 | +1.1 |
| 2,544,058 | - | yfeU | b2428 | 0.29 | +0.5 |
| 2,544,130 | - | yfeU | b2428 | 0.37 | -0.9 |
| 2,544,130 | - | yfeU | b2428 | 0.37 | -0.4 |
| 2,544,390 | - | yfeU | b2428 | 0.66 | -1.7 |
| 2,544,425 | + | yfeU | b2428 | 0.70 | +1.9 |
| 2,544,425 | + | yfeU | b2428 | 0.70 | -0.4 |
Or see this region's nucleotide sequence