Strain Fitness in Escherichia coli BW25113 around b2293
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
2,408,494 | + | yfbS | b2292 | 0.52 | +0.6 |
2,408,519 | - | yfbS | b2292 | 0.53 | -0.2 |
2,408,593 | - | yfbS | b2292 | 0.57 | -1.3 |
2,408,736 | + | yfbS | b2292 | 0.65 | -0.8 |
2,408,764 | - | yfbS | b2292 | 0.67 | +0.3 |
2,408,775 | - | yfbS | b2292 | 0.67 | -0.0 |
2,408,818 | + | yfbS | b2292 | 0.70 | +1.6 |
2,408,818 | + | yfbS | b2292 | 0.70 | -0.6 |
2,408,911 | + | yfbS | b2292 | 0.75 | -1.6 |
2,408,911 | + | yfbS | b2292 | 0.75 | -0.0 |
2,408,932 | - | yfbS | b2292 | 0.76 | +0.1 |
2,409,178 | + | yfbS | b2292 | 0.89 | -0.2 |
2,409,178 | + | yfbS | b2292 | 0.89 | +0.6 |
2,409,195 | + | -1.0 | |||
2,409,195 | + | -0.9 | |||
2,409,208 | - | -2.7 | |||
2,409,251 | - | +1.3 | |||
2,409,258 | - | +1.1 | |||
2,409,513 | + | +0.1 | |||
2,409,636 | + | yfbT | b2293 | 0.27 | +0.4 |
2,409,641 | + | yfbT | b2293 | 0.28 | -0.6 |
2,409,913 | - | yfbT | b2293 | 0.69 | -0.5 |
2,410,159 | + | -0.4 | |||
2,410,161 | - | -0.0 | |||
2,410,287 | - | b2294 | b2294 | 0.33 | -0.2 |
2,410,358 | + | b2294 | b2294 | 0.48 | -3.2 |
2,410,358 | + | b2294 | b2294 | 0.48 | +0.7 |
2,410,426 | - | b2294 | b2294 | 0.61 | -0.3 |
2,410,435 | - | b2294 | b2294 | 0.63 | -0.0 |
2,410,435 | - | b2294 | b2294 | 0.63 | +0.5 |
2,410,467 | + | b2294 | b2294 | 0.70 | +1.6 |
2,410,467 | + | b2294 | b2294 | 0.70 | +0.2 |
2,410,508 | + | b2294 | b2294 | 0.78 | -2.3 |
2,410,538 | - | b2294 | b2294 | 0.84 | -0.0 |
2,410,538 | - | b2294 | b2294 | 0.84 | -1.0 |
2,410,550 | + | b2294 | b2294 | 0.86 | -0.3 |
2,410,561 | + | b2294 | b2294 | 0.89 | +2.0 |
2,410,567 | + | -0.5 | |||
2,410,567 | + | -0.9 | |||
2,410,618 | + | +0.2 | |||
2,410,623 | + | +0.7 | |||
2,410,636 | - | -1.6 | |||
2,410,636 | - | -1.3 | |||
2,410,673 | + | +1.4 | |||
2,410,673 | + | -2.2 | |||
2,410,726 | - | -0.2 | |||
2,410,765 | - | yfbV | b2295 | 0.14 | +0.4 |
2,410,808 | + | yfbV | b2295 | 0.24 | -1.6 |
2,410,808 | + | yfbV | b2295 | 0.24 | -1.1 |
2,410,811 | - | yfbV | b2295 | 0.25 | -0.2 |
2,410,858 | + | yfbV | b2295 | 0.35 | -0.8 |
2,410,864 | + | yfbV | b2295 | 0.36 | +0.7 |
2,410,866 | - | yfbV | b2295 | 0.37 | -0.2 |
2,410,886 | + | yfbV | b2295 | 0.41 | -0.3 |
2,410,934 | - | yfbV | b2295 | 0.52 | -0.5 |
2,410,946 | - | yfbV | b2295 | 0.54 | -2.8 |
2,410,948 | + | yfbV | b2295 | 0.55 | -0.4 |
2,411,001 | + | yfbV | b2295 | 0.66 | +1.6 |
Or see this region's nucleotide sequence