Strain Fitness in Escherichia coli BW25113 around b2048
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
|---|---|---|---|---|---|
| remove | |||||
| 2,119,085 | - | wcaJ | b2047 | 0.65 | +2.7 |
| 2,119,106 | - | wcaJ | b2047 | 0.66 | -2.1 |
| 2,119,436 | - | wcaJ | b2047 | 0.90 | -0.8 |
| 2,119,436 | - | wcaJ | b2047 | 0.90 | +3.9 |
| 2,119,439 | + | +0.8 | |||
| 2,119,439 | + | +0.8 | |||
| 2,119,476 | + | +1.9 | |||
| 2,119,520 | + | -1.1 | |||
| 2,119,536 | - | -2.1 | |||
| 2,119,599 | + | -2.1 | |||
| 2,119,796 | + | cpsG | b2048 | 0.12 | -1.7 |
| 2,119,959 | + | cpsG | b2048 | 0.24 | +0.7 |
| 2,120,189 | + | cpsG | b2048 | 0.41 | -1.3 |
| 2,120,628 | - | cpsG | b2048 | 0.73 | -2.3 |
| 2,120,645 | - | cpsG | b2048 | 0.74 | -0.6 |
| 2,120,645 | - | cpsG | b2048 | 0.74 | -1.9 |
| 2,120,689 | + | cpsG | b2048 | 0.77 | -0.7 |
| 2,120,759 | + | cpsG | b2048 | 0.82 | +0.9 |
| 2,120,759 | + | cpsG | b2048 | 0.82 | -0.1 |
| 2,120,782 | - | cpsG | b2048 | 0.84 | -2.3 |
| 2,120,814 | + | cpsG | b2048 | 0.86 | +0.7 |
| 2,120,823 | - | cpsG | b2048 | 0.87 | +0.5 |
| 2,120,880 | - | -1.1 | |||
| 2,120,880 | - | -1.7 | |||
| 2,121,026 | + | +2.3 | |||
| 2,121,026 | + | +1.5 | |||
| 2,121,027 | + | -3.1 | |||
| 2,121,354 | + | cpsB | b2049 | 0.17 | -2.3 |
| 2,121,354 | + | cpsB | b2049 | 0.17 | -0.7 |
| 2,121,452 | + | cpsB | b2049 | 0.24 | +1.4 |
| 2,121,452 | + | cpsB | b2049 | 0.24 | +0.9 |
| 2,121,504 | + | cpsB | b2049 | 0.28 | -2.3 |
| 2,121,605 | + | cpsB | b2049 | 0.35 | -1.1 |
| 2,121,742 | + | cpsB | b2049 | 0.44 | +0.5 |
| 2,121,742 | + | cpsB | b2049 | 0.44 | -0.8 |
| 2,121,969 | + | cpsB | b2049 | 0.60 | +0.9 |
Or see this region's nucleotide sequence