Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt b2001 and yeeS overlap by 4 nucleotides yeeS and yeeT are separated by 62 nucleotides yeeT and yeeU are separated by 73 nucleotides yeeU and yeeV are separated by 88 nucleotides
b2001: b2001 - orf, hypothetical protein (VIMSS), at 2,072,803 to 2,074,335
b2001
b2002: yeeS - CP4-44 prophage; predicted DNA repair protein (NCBI), at 2,074,332 to 2,074,778
yeeS
b2003: yeeT - CP4-44 prophage; predicted protein (NCBI), at 2,074,841 to 2,075,062
yeeT
b2004: yeeU - CP4-44 prophage; antitoxin of the YeeV-YeeU toxin-antitoxin system (NCBI), at 2,075,136 to 2,075,504
yeeU
b2005: yeeV - CP4-44 prophage; toxin of the YeeV-YeeU toxin-antitoxin system (NCBI), at 2,075,593 to 2,075,967
yeeV
Position (kb)
2074
2075 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2073.398 kb on + strand, within b2001 at 2073.398 kb on + strand, within b2001 at 2073.492 kb on + strand, within b2001 at 2073.492 kb on + strand, within b2001 at 2073.512 kb on - strand, within b2001 at 2073.564 kb on - strand, within b2001 at 2073.626 kb on + strand, within b2001 at 2073.652 kb on - strand, within b2001 at 2073.652 kb on - strand, within b2001 at 2073.736 kb on + strand, within b2001 at 2073.786 kb on - strand, within b2001 at 2073.786 kb on - strand, within b2001 at 2073.820 kb on + strand, within b2001 at 2073.820 kb on + strand, within b2001 at 2073.877 kb on - strand, within b2001 at 2073.890 kb on + strand, within b2001 at 2073.890 kb on + strand, within b2001 at 2074.027 kb on + strand, within b2001 at 2074.108 kb on - strand, within b2001 at 2074.258 kb on + strand at 2074.258 kb on + strand at 2074.262 kb on + strand at 2074.319 kb on + strand at 2074.396 kb on + strand, within yeeS at 2074.498 kb on + strand, within yeeS at 2074.527 kb on + strand, within yeeS at 2074.527 kb on + strand, within yeeS at 2074.565 kb on - strand, within yeeS at 2074.622 kb on + strand, within yeeS at 2074.649 kb on + strand, within yeeS at 2074.657 kb on - strand, within yeeS at 2074.690 kb on + strand, within yeeS at 2074.696 kb on + strand, within yeeS at 2074.696 kb on - strand, within yeeS at 2074.782 kb on + strand at 2074.865 kb on + strand, within yeeT at 2074.920 kb on - strand, within yeeT at 2074.949 kb on - strand, within yeeT at 2074.949 kb on - strand, within yeeT at 2075.051 kb on + strand at 2075.051 kb on + strand at 2075.051 kb on + strand at 2075.199 kb on - strand, within yeeU at 2075.199 kb on - strand, within yeeU at 2075.201 kb on + strand, within yeeU at 2075.209 kb on + strand, within yeeU at 2075.302 kb on + strand, within yeeU at 2075.407 kb on + strand, within yeeU at 2075.416 kb on + strand, within yeeU at 2075.452 kb on - strand, within yeeU at 2075.452 kb on - strand, within yeeU at 2075.642 kb on + strand, within yeeV at 2075.642 kb on + strand, within yeeV
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 2,073,398 + b2001 b2001 0.39 +1.4 2,073,398 + b2001 b2001 0.39 +1.7 2,073,492 + b2001 b2001 0.45 +1.6 2,073,492 + b2001 b2001 0.45 +1.3 2,073,512 - b2001 b2001 0.46 -1.4 2,073,564 - b2001 b2001 0.50 -0.3 2,073,626 + b2001 b2001 0.54 +0.7 2,073,652 - b2001 b2001 0.55 -2.0 2,073,652 - b2001 b2001 0.55 +0.6 2,073,736 + b2001 b2001 0.61 -0.1 2,073,786 - b2001 b2001 0.64 +0.6 2,073,786 - b2001 b2001 0.64 -1.1 2,073,820 + b2001 b2001 0.66 +1.9 2,073,820 + b2001 b2001 0.66 -1.9 2,073,877 - b2001 b2001 0.70 +1.9 2,073,890 + b2001 b2001 0.71 -0.6 2,073,890 + b2001 b2001 0.71 +1.4 2,074,027 + b2001 b2001 0.80 +0.1 2,074,108 - b2001 b2001 0.85 +0.9 2,074,258 + +0.4 2,074,258 + +0.1 2,074,262 + -0.3 2,074,319 + +0.3 2,074,396 + yeeS b2002 0.14 +2.1 2,074,498 + yeeS b2002 0.37 +0.7 2,074,527 + yeeS b2002 0.44 -0.1 2,074,527 + yeeS b2002 0.44 +0.7 2,074,565 - yeeS b2002 0.52 -0.5 2,074,622 + yeeS b2002 0.65 +1.2 2,074,649 + yeeS b2002 0.71 +0.4 2,074,657 - yeeS b2002 0.73 +1.1 2,074,690 + yeeS b2002 0.80 +1.6 2,074,696 + yeeS b2002 0.81 +0.1 2,074,696 - yeeS b2002 0.81 +0.5 2,074,782 + -0.4 2,074,865 + yeeT b2003 0.11 -0.6 2,074,920 - yeeT b2003 0.36 +0.5 2,074,949 - yeeT b2003 0.49 -0.4 2,074,949 - yeeT b2003 0.49 +0.4 2,075,051 + +0.6 2,075,051 + -2.0 2,075,051 + -2.6 2,075,199 - yeeU b2004 0.17 +1.9 2,075,199 - yeeU b2004 0.17 +1.9 2,075,201 + yeeU b2004 0.18 +1.3 2,075,209 + yeeU b2004 0.20 -0.3 2,075,302 + yeeU b2004 0.45 +0.9 2,075,407 + yeeU b2004 0.73 +0.5 2,075,416 + yeeU b2004 0.76 -0.6 2,075,452 - yeeU b2004 0.86 +0.4 2,075,452 - yeeU b2004 0.86 -1.4 2,075,642 + yeeV b2005 0.13 +0.9 2,075,642 + yeeV b2005 0.13 -0.1
Or see this region's nucleotide sequence