Strain Fitness in Escherichia coli BW25113 around b1940
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
2,012,922 | + | +2.1 | |||
2,012,979 | + | +0.3 | |||
2,012,979 | + | -0.2 | |||
2,013,108 | + | fliG | b1939 | 0.20 | +0.3 |
2,013,108 | + | fliG | b1939 | 0.20 | +0.9 |
2,013,149 | - | fliG | b1939 | 0.25 | -1.2 |
2,013,444 | + | fliG | b1939 | 0.54 | -1.1 |
2,014,036 | + | fliH | b1940 | 0.21 | -0.4 |
2,014,099 | - | fliH | b1940 | 0.30 | +0.0 |
2,014,120 | + | fliH | b1940 | 0.33 | +0.3 |
2,014,214 | + | fliH | b1940 | 0.47 | -0.7 |
2,014,240 | - | fliH | b1940 | 0.51 | -0.7 |
2,014,246 | + | fliH | b1940 | 0.52 | +0.6 |
2,014,318 | - | fliH | b1940 | 0.62 | +1.3 |
2,014,336 | + | fliH | b1940 | 0.65 | +2.6 |
2,014,404 | - | fliH | b1940 | 0.75 | +0.4 |
2,014,562 | + | -0.7 | |||
2,014,562 | + | +0.9 | |||
2,014,829 | + | fliI | b1941 | 0.18 | -0.6 |
2,014,829 | + | fliI | b1941 | 0.18 | -0.4 |
2,014,917 | - | fliI | b1941 | 0.25 | -0.9 |
2,014,920 | + | fliI | b1941 | 0.25 | -0.1 |
2,014,920 | + | fliI | b1941 | 0.25 | +1.5 |
2,015,057 | - | fliI | b1941 | 0.35 | -0.6 |
2,015,057 | - | +0.9 | |||
2,015,259 | - | fliI | b1941 | 0.50 | +0.9 |
2,015,261 | - | fliI | b1941 | 0.50 | -1.9 |
2,015,261 | - | fliI | b1941 | 0.50 | +0.2 |
2,015,499 | - | fliI | b1941 | 0.67 | -1.1 |
2,015,549 | + | fliI | b1941 | 0.71 | -0.1 |
2,015,549 | + | fliI | b1941 | 0.71 | +0.9 |
2,015,560 | + | fliI | b1941 | 0.71 | +0.8 |
Or see this region's nucleotide sequence