Strain Fitness in Escherichia coli BW25113 around b1938
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
2,010,417 | - | -0.5 | |||
2,010,449 | - | +0.8 | |||
2,010,511 | - | +1.7 | |||
2,010,520 | - | +2.3 | |||
2,010,530 | - | +1.2 | |||
2,010,530 | - | -0.1 | |||
2,010,547 | + | intG | b1936 | 0.13 | +0.4 |
2,010,555 | - | intG | b1936 | 0.18 | +1.2 |
2,010,629 | - | intG | b1936 | 0.64 | +0.5 |
2,010,673 | + | +0.5 | |||
2,011,024 | + | -0.5 | |||
2,011,097 | - | -2.2 | |||
2,011,163 | - | +0.9 | |||
2,011,228 | + | +1.6 | |||
2,011,236 | - | +0.5 | |||
2,011,367 | + | -2.5 | |||
2,011,626 | - | fliF | b1938 | 0.22 | +1.5 |
2,011,626 | - | fliF | b1938 | 0.22 | -2.7 |
2,011,781 | + | fliF | b1938 | 0.32 | +0.6 |
2,011,856 | - | fliF | b1938 | 0.36 | +0.8 |
2,012,056 | - | fliF | b1938 | 0.48 | +2.6 |
2,012,086 | + | fliF | b1938 | 0.50 | -2.8 |
2,012,086 | + | fliF | b1938 | 0.50 | +0.2 |
2,012,086 | + | fliF | b1938 | 0.50 | -2.2 |
2,012,143 | - | fliF | b1938 | 0.54 | -0.1 |
2,012,143 | - | fliF | b1938 | 0.54 | -0.1 |
2,012,165 | - | fliF | b1938 | 0.55 | +0.9 |
2,012,208 | - | fliF | b1938 | 0.58 | -1.1 |
2,012,208 | - | fliF | b1938 | 0.58 | +0.2 |
2,012,276 | + | fliF | b1938 | 0.62 | -1.1 |
2,012,281 | + | fliF | b1938 | 0.62 | -0.1 |
2,012,281 | + | fliF | b1938 | 0.62 | -0.2 |
2,012,443 | - | fliF | b1938 | 0.72 | -0.5 |
2,012,523 | - | fliF | b1938 | 0.77 | +1.4 |
2,012,812 | - | +1.4 | |||
2,012,830 | + | +0.6 | |||
2,012,865 | + | -0.8 | |||
2,012,873 | - | -0.1 | |||
2,012,922 | + | +2.1 | |||
2,012,979 | + | +0.3 | |||
2,012,979 | + | -0.2 | |||
2,013,108 | + | fliG | b1939 | 0.20 | +0.3 |
2,013,108 | + | fliG | b1939 | 0.20 | +0.9 |
2,013,149 | - | fliG | b1939 | 0.25 | -1.2 |
2,013,444 | + | fliG | b1939 | 0.54 | -1.1 |
Or see this region's nucleotide sequence