Strain Fitness in Escherichia coli BW25113 around b1682
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
1,758,821 | - | sufD | b1681 | 0.22 | +0.1 |
1,759,046 | - | sufD | b1681 | 0.39 | +0.8 |
1,759,046 | - | sufD | b1681 | 0.39 | -0.2 |
1,759,054 | + | sufD | b1681 | 0.40 | -1.5 |
1,759,134 | + | sufD | b1681 | 0.46 | +0.8 |
1,759,288 | + | sufD | b1681 | 0.58 | -1.3 |
1,759,296 | - | sufD | b1681 | 0.59 | -1.1 |
1,759,345 | - | sufD | b1681 | 0.63 | -0.6 |
1,759,576 | - | sufD | b1681 | 0.81 | +0.3 |
1,759,578 | - | sufD | b1681 | 0.81 | +1.5 |
1,759,578 | - | sufD | b1681 | 0.81 | +0.6 |
1,759,590 | - | sufD | b1681 | 0.82 | +0.1 |
1,759,590 | - | sufD | b1681 | 0.82 | +1.4 |
1,759,624 | + | sufD | b1681 | 0.85 | +1.8 |
1,759,624 | + | sufD | b1681 | 0.85 | -0.5 |
1,759,806 | - | +1.5 | |||
1,759,806 | - | -0.8 | |||
1,759,812 | + | +0.0 | |||
1,759,812 | + | -2.2 | |||
1,759,877 | + | sufC | b1682 | 0.12 | +0.3 |
1,759,902 | - | sufC | b1682 | 0.15 | +0.6 |
1,759,902 | - | sufC | b1682 | 0.15 | -2.2 |
1,759,907 | - | sufC | b1682 | 0.16 | +0.5 |
1,759,944 | + | sufC | b1682 | 0.21 | -1.8 |
1,759,944 | + | sufC | b1682 | 0.21 | +1.9 |
1,759,999 | + | sufC | b1682 | 0.28 | -1.6 |
1,760,009 | - | sufC | b1682 | 0.29 | +1.2 |
1,760,777 | - | ynhE | b1683 | 0.16 | +0.1 |
1,760,788 | - | ynhE | b1683 | 0.16 | -2.5 |
1,760,968 | - | ynhE | b1683 | 0.28 | -1.2 |
1,760,968 | - | ynhE | b1683 | 0.28 | -0.8 |
1,761,252 | - | ynhE | b1683 | 0.47 | -0.6 |
1,761,371 | + | ynhE | b1683 | 0.55 | +1.2 |
1,761,462 | + | ynhE | b1683 | 0.62 | -0.6 |
Or see this region's nucleotide sequence