Strain Fitness in Escherichia coli BW25113 around b1636
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
|---|---|---|---|---|---|
| remove | |||||
| 1,712,070 | - | tppB | b1634 | 0.85 | +1.5 |
| 1,712,104 | - | tppB | b1634 | 0.87 | +0.7 |
| 1,712,104 | - | tppB | b1634 | 0.87 | +1.4 |
| 1,712,109 | + | tppB | b1634 | 0.88 | +1.5 |
| 1,712,543 | - | gst | b1635 | 0.23 | -1.8 |
| 1,712,623 | - | gst | b1635 | 0.37 | -0.1 |
| 1,712,715 | + | gst | b1635 | 0.52 | -1.9 |
| 1,713,214 | + | pdxY | b1636 | 0.19 | -2.0 |
| 1,713,223 | + | pdxY | b1636 | 0.20 | -1.6 |
| 1,713,223 | + | pdxY | b1636 | 0.20 | -1.6 |
| 1,713,223 | + | pdxY | b1636 | 0.20 | -2.3 |
| 1,713,352 | - | pdxY | b1636 | 0.35 | -0.6 |
| 1,713,469 | + | pdxY | b1636 | 0.48 | -1.3 |
| 1,713,546 | - | pdxY | b1636 | 0.57 | +0.1 |
| 1,713,571 | + | pdxY | b1636 | 0.60 | -0.3 |
| 1,713,571 | + | pdxY | b1636 | 0.60 | -0.3 |
| 1,713,624 | - | pdxY | b1636 | 0.66 | +0.6 |
| 1,713,889 | + | +0.7 | |||
| 1,713,889 | + | -0.3 | |||
| 1,713,913 | + | +1.0 | |||
| 1,713,913 | + | -0.6 |
Or see this region's nucleotide sequence