Strain Fitness in Escherichia coli BW25113 around b1634
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
1,709,843 | + | nth | b1633 | 0.47 | -0.5 |
1,709,859 | + | nth | b1633 | 0.49 | +0.8 |
1,709,859 | + | nth | b1633 | 0.49 | -2.3 |
1,709,876 | + | nth | b1633 | 0.52 | -0.3 |
1,709,876 | + | nth | b1633 | 0.52 | +2.1 |
1,710,159 | + | +0.1 | |||
1,710,274 | - | +0.7 | |||
1,710,551 | - | +0.9 | |||
1,710,837 | - | +2.8 | |||
1,710,838 | - | +1.5 | |||
1,710,870 | - | +0.7 | |||
1,711,174 | - | tppB | b1634 | 0.25 | +0.1 |
1,711,239 | - | tppB | b1634 | 0.30 | +1.7 |
1,711,254 | + | tppB | b1634 | 0.31 | +0.2 |
1,711,352 | + | tppB | b1634 | 0.37 | +1.7 |
1,711,360 | - | tppB | b1634 | 0.38 | +2.5 |
1,711,360 | - | tppB | b1634 | 0.38 | +0.7 |
1,711,360 | - | tppB | b1634 | 0.38 | +1.5 |
1,711,402 | + | tppB | b1634 | 0.41 | +2.7 |
1,711,402 | + | tppB | b1634 | 0.41 | -0.9 |
1,711,536 | + | tppB | b1634 | 0.49 | -0.3 |
1,711,536 | + | tppB | b1634 | 0.49 | +1.5 |
1,711,582 | - | tppB | b1634 | 0.52 | +1.9 |
1,711,803 | - | tppB | b1634 | 0.67 | +1.9 |
1,711,932 | - | tppB | b1634 | 0.76 | -0.3 |
1,711,978 | - | tppB | b1634 | 0.79 | -0.9 |
1,712,070 | - | tppB | b1634 | 0.85 | +1.5 |
1,712,104 | - | tppB | b1634 | 0.87 | +0.7 |
1,712,104 | - | tppB | b1634 | 0.87 | +1.4 |
1,712,109 | + | tppB | b1634 | 0.88 | +1.5 |
1,712,543 | - | gst | b1635 | 0.23 | -1.8 |
1,712,623 | - | gst | b1635 | 0.37 | -0.1 |
1,712,715 | + | gst | b1635 | 0.52 | -1.9 |
1,713,214 | + | pdxY | b1636 | 0.19 | -2.0 |
1,713,223 | + | pdxY | b1636 | 0.20 | -1.6 |
1,713,223 | + | pdxY | b1636 | 0.20 | -1.6 |
1,713,223 | + | pdxY | b1636 | 0.20 | -2.3 |
Or see this region's nucleotide sequence