Strain Fitness in Escherichia coli BW25113 around b1322
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
|---|---|---|---|---|---|
| remove | |||||
| 1,382,625 | - | ycjX | b1321 | 0.35 | -0.1 |
| 1,382,756 | - | ycjX | b1321 | 0.44 | -0.4 |
| 1,382,767 | - | ycjX | b1321 | 0.45 | +0.2 |
| 1,382,860 | - | ycjX | b1321 | 0.51 | -0.8 |
| 1,382,860 | - | ycjX | b1321 | 0.51 | -1.9 |
| 1,383,086 | + | ycjX | b1321 | 0.68 | -1.5 |
| 1,383,211 | - | ycjX | b1321 | 0.77 | -0.4 |
| 1,383,269 | - | ycjX | b1321 | 0.81 | -1.2 |
| 1,383,365 | - | ycjX | b1321 | 0.88 | -0.2 |
| 1,383,365 | - | ycjX | b1321 | 0.88 | -1.8 |
| 1,383,367 | - | ycjX | b1321 | 0.88 | -1.1 |
| 1,383,572 | + | +0.8 | |||
| 1,383,781 | + | ycjF | b1322 | 0.23 | -0.5 |
| 1,383,801 | - | ycjF | b1322 | 0.25 | -2.2 |
| 1,383,801 | - | ycjF | b1322 | 0.25 | -1.8 |
| 1,383,828 | - | ycjF | b1322 | 0.28 | -0.8 |
| 1,383,892 | + | ycjF | b1322 | 0.34 | -0.2 |
| 1,383,892 | + | ycjF | b1322 | 0.34 | -1.4 |
| 1,383,937 | - | ycjF | b1322 | 0.38 | -0.3 |
| 1,384,032 | + | ycjF | b1322 | 0.47 | -1.2 |
| 1,384,032 | + | ycjF | b1322 | 0.47 | -3.2 |
| 1,384,214 | + | ycjF | b1322 | 0.64 | -1.2 |
| 1,384,214 | + | ycjF | b1322 | 0.64 | +0.2 |
| 1,384,420 | + | ycjF | b1322 | 0.83 | +0.5 |
| 1,384,428 | - | ycjF | b1322 | 0.84 | -2.5 |
| 1,384,428 | - | ycjF | b1322 | 0.84 | -0.5 |
| 1,384,428 | - | ycjF | b1322 | 0.84 | -2.5 |
| 1,384,941 | + | tyrR | b1323 | 0.13 | -1.1 |
| 1,384,949 | - | tyrR | b1323 | 0.13 | -0.2 |
| 1,385,018 | - | tyrR | b1323 | 0.18 | -1.5 |
| 1,385,154 | + | tyrR | b1323 | 0.27 | -0.2 |
| 1,385,222 | + | tyrR | b1323 | 0.31 | -1.2 |
| 1,385,222 | + | tyrR | b1323 | 0.31 | -1.5 |
Or see this region's nucleotide sequence