Strain Fitness in Escherichia coli BW25113 around b1310
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
1,369,030 | - | ycjM | b1309 | 0.47 | +1.2 |
1,369,124 | + | ycjM | b1309 | 0.53 | -0.8 |
1,369,148 | - | ycjM | b1309 | 0.54 | -0.2 |
1,369,164 | - | ycjM | b1309 | 0.55 | +0.1 |
1,369,173 | + | ycjM | b1309 | 0.56 | -0.2 |
1,369,317 | + | ycjM | b1309 | 0.64 | +0.9 |
1,369,317 | + | ycjM | b1309 | 0.64 | -0.6 |
1,369,365 | + | ycjM | b1309 | 0.67 | +0.8 |
1,369,375 | + | ycjM | b1309 | 0.68 | +0.8 |
1,369,414 | + | ycjM | b1309 | 0.70 | -0.5 |
1,369,424 | + | ycjM | b1309 | 0.70 | +1.9 |
1,369,451 | + | ycjM | b1309 | 0.72 | -2.0 |
1,369,451 | + | ycjM | b1309 | 0.72 | -0.7 |
1,369,489 | + | ycjM | b1309 | 0.74 | -0.8 |
1,369,899 | - | +2.1 | |||
1,369,976 | - | +0.6 | |||
1,369,992 | - | -0.2 | |||
1,370,063 | - | ycjN | b1310 | 0.10 | -1.2 |
1,370,064 | - | ycjN | b1310 | 0.10 | +1.3 |
1,370,064 | - | ycjN | b1310 | 0.10 | +0.3 |
1,370,117 | - | ycjN | b1310 | 0.14 | +0.5 |
1,370,173 | - | ycjN | b1310 | 0.19 | -0.2 |
1,370,269 | + | ycjN | b1310 | 0.26 | -1.2 |
1,370,502 | + | ycjN | b1310 | 0.44 | -2.4 |
1,370,527 | + | ycjN | b1310 | 0.46 | -0.6 |
1,370,739 | - | ycjN | b1310 | 0.62 | -1.2 |
1,370,740 | - | ycjN | b1310 | 0.62 | -0.3 |
1,370,811 | + | ycjN | b1310 | 0.68 | +0.4 |
1,370,899 | - | ycjN | b1310 | 0.75 | -1.8 |
1,370,899 | - | ycjN | b1310 | 0.75 | -0.6 |
1,370,985 | - | ycjN | b1310 | 0.81 | -1.0 |
1,371,017 | + | ycjN | b1310 | 0.84 | -0.8 |
1,371,153 | + | -0.2 | |||
1,371,153 | + | -0.0 | |||
1,371,161 | - | -0.8 | |||
1,371,285 | + | +0.6 | |||
1,371,323 | - | -1.0 | |||
1,371,474 | + | ycjO | b1311 | 0.26 | -1.0 |
1,371,474 | + | ycjO | b1311 | 0.26 | +0.4 |
1,371,508 | - | ycjO | b1311 | 0.30 | -1.0 |
1,371,587 | + | ycjO | b1311 | 0.39 | +0.5 |
1,371,597 | + | ycjO | b1311 | 0.40 | +0.5 |
1,371,652 | - | ycjO | b1311 | 0.46 | -1.2 |
1,371,665 | - | ycjO | b1311 | 0.48 | +3.4 |
1,371,738 | - | ycjO | b1311 | 0.56 | +1.0 |
1,371,738 | - | ycjO | b1311 | 0.56 | +1.8 |
1,371,778 | - | ycjO | b1311 | 0.60 | +1.5 |
1,371,778 | - | ycjO | b1311 | 0.60 | +0.1 |
1,371,938 | - | ycjO | b1311 | 0.78 | +0.3 |
1,371,991 | + | ycjO | b1311 | 0.84 | +1.0 |
1,372,224 | - | ycjP | b1312 | 0.13 | -1.8 |
Or see this region's nucleotide sequence