Strain Fitness in Escherichia coli BW25113 around b1076
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
1,131,014 | + | flgC | b1074 | 0.87 | -0.7 |
1,131,014 | + | flgC | b1074 | 0.87 | -2.2 |
1,131,054 | - | -0.7 | |||
1,131,111 | + | +1.5 | |||
1,131,325 | + | flgD | b1075 | 0.36 | +0.0 |
1,131,362 | - | flgD | b1075 | 0.41 | +1.3 |
1,131,362 | - | flgD | b1075 | 0.41 | -0.3 |
1,131,586 | + | flgD | b1075 | 0.73 | -0.6 |
1,131,594 | - | flgD | b1075 | 0.74 | -1.1 |
1,131,794 | + | +2.4 | |||
1,131,794 | + | -2.0 | |||
1,131,846 | - | +1.8 | |||
1,131,996 | - | flgE | b1076 | 0.16 | -2.6 |
1,131,996 | - | flgE | b1076 | 0.16 | -0.6 |
1,132,002 | - | flgE | b1076 | 0.17 | -0.8 |
1,132,010 | + | flgE | b1076 | 0.18 | -0.6 |
1,132,176 | - | flgE | b1076 | 0.31 | +1.0 |
1,132,283 | - | flgE | b1076 | 0.40 | +0.5 |
1,132,366 | + | flgE | b1076 | 0.47 | -0.8 |
1,132,366 | + | flgE | b1076 | 0.47 | +1.0 |
1,132,384 | + | flgE | b1076 | 0.49 | +1.8 |
1,132,423 | + | flgE | b1076 | 0.52 | +0.2 |
1,132,463 | - | flgE | b1076 | 0.55 | -1.7 |
1,132,463 | - | flgE | b1076 | 0.55 | +1.4 |
1,132,510 | - | flgE | b1076 | 0.59 | -3.0 |
1,132,551 | + | flgE | b1076 | 0.62 | -1.8 |
1,132,559 | - | flgE | b1076 | 0.63 | -0.6 |
1,132,559 | - | flgE | b1076 | 0.63 | +0.4 |
1,132,574 | - | flgE | b1076 | 0.64 | -0.1 |
1,132,584 | - | flgE | b1076 | 0.65 | -0.8 |
1,132,605 | - | flgE | b1076 | 0.67 | -1.0 |
1,132,625 | - | flgE | b1076 | 0.68 | +1.0 |
1,132,625 | - | flgE | b1076 | 0.68 | +0.5 |
1,132,694 | - | flgE | b1076 | 0.74 | +0.2 |
1,132,979 | - | -2.1 | |||
1,132,986 | - | +1.6 | |||
1,132,998 | - | +0.0 | |||
1,132,998 | - | +1.3 | |||
1,133,002 | + | +0.7 | |||
1,133,037 | + | -1.6 | |||
1,133,162 | - | flgF | b1077 | 0.18 | +0.2 |
1,133,162 | - | flgF | b1077 | 0.18 | -1.3 |
1,133,215 | - | flgF | b1077 | 0.25 | -0.1 |
1,133,251 | - | flgF | b1077 | 0.30 | +0.4 |
1,133,251 | - | flgF | b1077 | 0.30 | -0.6 |
1,133,286 | - | flgF | b1077 | 0.35 | -0.4 |
1,133,318 | - | flgF | b1077 | 0.39 | -1.6 |
1,133,324 | - | flgF | b1077 | 0.40 | -0.0 |
1,133,336 | + | flgF | b1077 | 0.41 | +2.3 |
1,133,367 | + | flgF | b1077 | 0.45 | -1.3 |
1,133,389 | - | flgF | b1077 | 0.48 | -1.0 |
1,133,417 | - | flgF | b1077 | 0.52 | -1.1 |
1,133,467 | - | flgF | b1077 | 0.58 | +2.0 |
1,133,477 | + | flgF | b1077 | 0.60 | +0.2 |
1,133,610 | + | flgF | b1077 | 0.77 | +0.0 |
1,133,618 | - | flgF | b1077 | 0.78 | -1.7 |
1,133,833 | + | +0.8 |
Or see this region's nucleotide sequence