Strain Fitness in Escherichia coli BW25113 around b1074
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
---|---|---|---|---|---|
remove | |||||
1,129,663 | + | flgA | b1072 | 0.36 | +0.3 |
1,129,716 | + | flgA | b1072 | 0.44 | -2.6 |
1,129,771 | + | flgA | b1072 | 0.52 | +0.9 |
1,129,771 | + | flgA | b1072 | 0.52 | -0.6 |
1,129,810 | + | flgA | b1072 | 0.58 | -0.6 |
1,129,811 | - | flgA | b1072 | 0.58 | +1.4 |
1,129,813 | + | flgA | b1072 | 0.58 | -0.3 |
1,129,815 | + | flgA | b1072 | 0.59 | +1.0 |
1,129,815 | + | flgA | b1072 | 0.59 | -1.0 |
1,129,958 | + | flgA | b1072 | 0.80 | -1.1 |
1,130,045 | + | +0.4 | |||
1,130,097 | + | +0.1 | |||
1,130,110 | + | -0.1 | |||
1,130,161 | + | -0.2 | |||
1,130,236 | - | -0.8 | |||
1,130,238 | - | +3.0 | |||
1,130,238 | - | +2.8 | |||
1,130,270 | - | +0.9 | |||
1,130,352 | - | flgB | b1073 | 0.27 | +1.2 |
1,130,352 | - | flgB | b1073 | 0.27 | -3.1 |
1,130,411 | + | flgB | b1073 | 0.41 | -1.3 |
1,130,411 | + | flgB | b1073 | 0.41 | +0.0 |
1,130,456 | - | flgB | b1073 | 0.52 | +0.2 |
1,130,456 | - | flgB | b1073 | 0.52 | +0.0 |
1,130,513 | - | flgB | b1073 | 0.65 | -0.4 |
1,130,570 | - | flgB | b1073 | 0.79 | +0.7 |
1,130,693 | - | +2.3 | |||
1,130,701 | + | +1.3 | |||
1,131,014 | + | flgC | b1074 | 0.87 | -0.7 |
1,131,014 | + | flgC | b1074 | 0.87 | -2.2 |
1,131,054 | - | -0.7 | |||
1,131,111 | + | +1.5 | |||
1,131,325 | + | flgD | b1075 | 0.36 | +0.0 |
1,131,362 | - | flgD | b1075 | 0.41 | +1.3 |
1,131,362 | - | flgD | b1075 | 0.41 | -0.3 |
1,131,586 | + | flgD | b1075 | 0.73 | -0.6 |
1,131,594 | - | flgD | b1075 | 0.74 | -1.1 |
1,131,794 | + | +2.4 | |||
1,131,794 | + | -2.0 | |||
1,131,846 | - | +1.8 | |||
1,131,996 | - | flgE | b1076 | 0.16 | -2.6 |
1,131,996 | - | flgE | b1076 | 0.16 | -0.6 |
1,132,002 | - | flgE | b1076 | 0.17 | -0.8 |
1,132,010 | + | flgE | b1076 | 0.18 | -0.6 |
Or see this region's nucleotide sequence