Strain Fitness in Escherichia coli BW25113 around b0960

Experiment: Aluminum chloride 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Aluminum chloride 5 mM
1,020,001	-	sulA	b0958	0.72	-0.7
1,020,001	-	sulA	b0958	0.72	+0.2
1,020,042	+	sulA	b0958	0.80	+3.8
1,020,049	+	sulA	b0958	0.82	+0.1
1,020,049	+	sulA	b0958	0.82	+1.9
1,020,226	-				-0.9
1,020,419	+				+0.6
1,020,453	+	yccR	b0959	0.15	-0.5
1,020,496	-	yccR	b0959	0.21	+0.1
1,020,496	-	yccR	b0959	0.21	-1.5
1,020,529	+	yccR	b0959	0.27	+0.1
1,020,529	+	yccR	b0959	0.27	+1.1
1,020,534	+	yccR	b0959	0.27	-0.8
1,020,534	+	yccR	b0959	0.27	-1.1
1,020,558	-	yccR	b0959	0.31	-1.7
1,020,597	-	yccR	b0959	0.37	+0.4
1,020,605	-	yccR	b0959	0.39	+0.6
1,020,640	+	yccR	b0959	0.44	-0.2
1,020,799	-	yccR	b0959	0.70	+1.1
1,020,800	-	yccR	b0959	0.70	+2.0
1,020,894	+	yccR	b0959	0.85	-1.5
1,020,983	-				-0.5
1,020,998	-				+1.8
1,021,034	-				+1.1
1,021,151	-				-0.2
1,021,223	-	b0960	b0960	0.13	-0.5
1,021,267	+	b0960	b0960	0.15	-0.9
1,021,267	+	b0960	b0960	0.15	-1.1
1,021,335	+	b0960	b0960	0.18	+2.4
1,021,342	-	b0960	b0960	0.18	-0.7
1,021,377	-	b0960	b0960	0.20	-1.9
1,021,441	-	b0960	b0960	0.23	-0.9
1,021,473	-	b0960	b0960	0.24	-0.9
1,021,483	+	b0960	b0960	0.25	-0.5
1,021,483	+	b0960	b0960	0.25	-1.8
1,021,526	-	b0960	b0960	0.27	-2.3
1,021,526	-	b0960	b0960	0.27	-1.5
1,021,558	-	b0960	b0960	0.28	-0.3
1,021,624	-	b0960	b0960	0.31	-0.6
1,021,661	-	b0960	b0960	0.33	+1.5
1,021,751	+	b0960	b0960	0.37	-0.5
1,021,751	+	b0960	b0960	0.37	-1.1
1,021,764	-	b0960	b0960	0.38	-0.7
1,021,920	+	b0960	b0960	0.45	-1.3
1,021,920	+	b0960	b0960	0.45	-0.5
1,021,983	-	b0960	b0960	0.48	-2.9
1,021,983	-	b0960	b0960	0.48	-2.4
1,022,028	+	b0960	b0960	0.50	-1.7
1,022,033	+	b0960	b0960	0.50	-0.5
1,022,053	+	b0960	b0960	0.51	-1.3
1,022,308	+	b0960	b0960	0.63	-1.3
1,022,316	-	b0960	b0960	0.63	-1.8
1,022,316	-	b0960	b0960	0.63	-2.6
1,022,336	-	b0960	b0960	0.64	+1.1
1,022,444	-	b0960	b0960	0.69	-2.3
1,022,444	-	b0960	b0960	0.69	-2.3
1,022,446	-	b0960	b0960	0.69	-0.4
1,022,512	+	b0960	b0960	0.72	+1.4
1,022,512	-	b0960	b0960	0.72	-0.9
1,022,565	+	b0960	b0960	0.75	-0.4
1,022,602	-	b0960	b0960	0.77	-0.9
1,022,603	+	b0960	b0960	0.77	-1.3
1,022,603	+	b0960	b0960	0.77	-1.3
1,022,644	+	b0960	b0960	0.79	-1.7
1,022,703	+	b0960	b0960	0.81	-0.1
1,022,713	-	b0960	b0960	0.82	+0.3
1,022,810	+	b0960	b0960	0.86	+1.6
1,022,819	+	b0960	b0960	0.87	-1.7
1,022,852	-	b0960	b0960	0.88	-0.8
1,022,884	-	b0960	b0960	0.90	-3.0
1,022,884	-	b0960	b0960	0.90	-0.4
1,022,886	+	b0960	b0960	0.90	-0.9
1,023,008	+				-1.5
1,023,160	+				-2.1
1,023,160	+				-1.9
1,023,170	-	yccF	b0961	0.10	-0.4
1,023,179	-	yccF	b0961	0.12	-0.5
1,023,400	+	yccF	b0961	0.62	-3.2
1,023,423	+	yccF	b0961	0.67	-0.5
1,023,423	+	yccF	b0961	0.67	-2.4
1,023,488	+	yccF	b0961	0.81	-1.6
1,023,512	+	yccF	b0961	0.87	-1.9
1,023,525	-	yccF	b0961	0.89	+0.1
1,023,525	-	yccF	b0961	0.89	+1.2
1,023,588	-				+1.7
1,023,689	-				-0.9
1,023,689	-				+2.2
1,023,698	-				+2.1
1,023,770	+				-1.7
1,023,770	+				+0.2
1,023,867	-				+0.3
1,023,867	-				+0.1
1,023,876	+				+2.3
1,023,937	-	helD	b0962	0.12	-1.3