Strain Fitness in Escherichia coli BW25113 around b0870
Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Aluminum chloride 5 mM |
|---|---|---|---|---|---|
| remove | |||||
| 906,527 | + | ybjT | b0869 | 0.32 | +0.5 |
| 906,527 | + | ybjT | b0869 | 0.32 | -1.4 |
| 906,635 | - | ybjT | b0869 | 0.39 | -0.2 |
| 906,667 | - | ybjT | b0869 | 0.41 | -0.5 |
| 906,667 | - | ybjT | b0869 | 0.41 | -1.9 |
| 906,865 | - | ybjT | b0869 | 0.55 | +0.7 |
| 907,084 | + | ybjT | b0869 | 0.71 | +0.3 |
| 907,090 | + | ybjT | b0869 | 0.71 | -0.4 |
| 907,090 | + | ybjT | b0869 | 0.71 | -1.3 |
| 907,271 | + | ybjT | b0869 | 0.84 | -3.1 |
| 907,385 | + | -0.9 | |||
| 907,462 | + | -0.5 | |||
| 907,473 | - | -2.6 | |||
| 908,109 | + | ltaE | b0870 | 0.59 | -0.1 |
| 908,179 | - | ltaE | b0870 | 0.66 | +1.4 |
| 908,192 | - | ltaE | b0870 | 0.67 | +2.0 |
| 908,220 | + | ltaE | b0870 | 0.70 | +2.3 |
| 908,235 | + | ltaE | b0870 | 0.72 | -0.8 |
| 908,314 | + | ltaE | b0870 | 0.80 | +1.2 |
| 908,337 | + | ltaE | b0870 | 0.82 | -0.2 |
| 908,403 | - | ltaE | b0870 | 0.89 | +1.8 |
| 908,461 | - | +0.6 | |||
| 908,493 | + | -1.5 | |||
| 908,493 | + | +2.1 | |||
| 908,513 | + | +1.2 | |||
| 908,626 | + | +1.1 | |||
| 908,626 | + | +1.1 | |||
| 908,794 | + | poxB | b0871 | 0.14 | +0.2 |
| 908,819 | + | poxB | b0871 | 0.15 | +0.1 |
| 908,939 | + | poxB | b0871 | 0.22 | +1.3 |
| 909,025 | - | poxB | b0871 | 0.27 | +1.8 |
| 909,025 | - | poxB | b0871 | 0.27 | -0.1 |
| 909,079 | - | +1.1 | |||
| 909,134 | + | poxB | b0871 | 0.34 | -0.8 |
| 909,142 | + | poxB | b0871 | 0.34 | -0.5 |
| 909,183 | + | poxB | b0871 | 0.37 | -0.5 |
| 909,183 | + | poxB | b0871 | 0.37 | +1.1 |
| 909,465 | - | poxB | b0871 | 0.53 | +0.1 |
| 909,465 | - | poxB | b0871 | 0.53 | +0.1 |
Or see this region's nucleotide sequence