Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt copA and ybaS are separated by 261 nucleotides ybaS and ybaT are separated by 2 nucleotides
b0484: copA - copper transporter (NCBI), at 508,099 to 510,603
copA
b0485: ybaS - predicted glutaminase (NCBI), at 510,865 to 511,797
ybaS
b0486: ybaT - predicted transporter (NCBI), at 511,800 to 513,092
ybaT
Position (kb)
510
511
512 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 509.929 kb on + strand, within copA at 509.935 kb on + strand, within copA at 510.004 kb on - strand, within copA at 510.019 kb on + strand, within copA at 510.186 kb on + strand, within copA at 510.217 kb on - strand, within copA at 510.217 kb on - strand, within copA at 510.264 kb on - strand, within copA at 510.266 kb on + strand, within copA at 510.272 kb on + strand, within copA at 510.277 kb on + strand, within copA at 510.453 kb on + strand at 510.461 kb on - strand at 510.461 kb on - strand at 510.488 kb on + strand at 510.515 kb on - strand at 510.523 kb on - strand at 510.525 kb on + strand at 510.525 kb on + strand at 510.587 kb on - strand at 510.631 kb on - strand at 510.651 kb on - strand at 510.652 kb on - strand at 510.844 kb on + strand at 510.903 kb on + strand at 510.903 kb on + strand at 510.979 kb on - strand, within ybaS at 510.979 kb on - strand, within ybaS at 511.000 kb on - strand, within ybaS at 511.172 kb on + strand, within ybaS at 511.172 kb on + strand, within ybaS at 511.359 kb on + strand, within ybaS at 511.389 kb on - strand, within ybaS at 511.392 kb on - strand, within ybaS at 511.434 kb on + strand, within ybaS at 511.583 kb on + strand, within ybaS at 511.583 kb on + strand, within ybaS at 511.673 kb on + strand, within ybaS at 511.673 kb on + strand, within ybaS at 511.673 kb on + strand, within ybaS at 511.980 kb on + strand, within ybaT at 512.081 kb on + strand, within ybaT at 512.081 kb on + strand, within ybaT at 512.171 kb on + strand, within ybaT at 512.239 kb on - strand, within ybaT at 512.413 kb on - strand, within ybaT at 512.414 kb on - strand, within ybaT at 512.514 kb on - strand, within ybaT at 512.567 kb on - strand, within ybaT at 512.604 kb on + strand, within ybaT at 512.771 kb on + strand, within ybaT
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 509,929 + copA b0484 0.73 -2.3 509,935 + copA b0484 0.73 +1.0 510,004 - copA b0484 0.76 +1.7 510,019 + copA b0484 0.77 +0.5 510,186 + copA b0484 0.83 -3.1 510,217 - copA b0484 0.85 -1.5 510,217 - copA b0484 0.85 +0.7 510,264 - copA b0484 0.86 -1.5 510,266 + copA b0484 0.87 -1.7 510,272 + copA b0484 0.87 +0.6 510,277 + copA b0484 0.87 -1.0 510,453 + +0.5 510,461 - +0.0 510,461 - +1.8 510,488 + -0.5 510,515 - -0.0 510,523 - +0.0 510,525 + +1.9 510,525 + +2.1 510,587 - +0.7 510,631 - -0.4 510,651 - -2.7 510,652 - -0.0 510,844 + +0.0 510,903 + -2.5 510,903 + +1.5 510,979 - ybaS b0485 0.12 -1.5 510,979 - ybaS b0485 0.12 -2.4 511,000 - ybaS b0485 0.14 -0.5 511,172 + ybaS b0485 0.33 -0.8 511,172 + ybaS b0485 0.33 +1.2 511,359 + ybaS b0485 0.53 +0.5 511,389 - ybaS b0485 0.56 -1.2 511,392 - ybaS b0485 0.56 -0.5 511,434 + ybaS b0485 0.61 -2.5 511,583 + ybaS b0485 0.77 +0.5 511,583 + ybaS b0485 0.77 +0.7 511,673 + ybaS b0485 0.87 -1.9 511,673 + ybaS b0485 0.87 -0.8 511,673 + ybaS b0485 0.87 -1.8 511,980 + ybaT b0486 0.14 +1.0 512,081 + ybaT b0486 0.22 +1.2 512,081 + ybaT b0486 0.22 +0.0 512,171 + ybaT b0486 0.29 +2.0 512,239 - ybaT b0486 0.34 +0.5 512,413 - ybaT b0486 0.47 -1.0 512,414 - ybaT b0486 0.47 -3.1 512,514 - ybaT b0486 0.55 +0.6 512,567 - ybaT b0486 0.59 +0.0 512,604 + ybaT b0486 0.62 +1.7 512,771 + ybaT b0486 0.75 +0.6
Or see this region's nucleotide sequence