Experiment: Aluminum chloride 5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ybaB and recR overlap by 1 nucleotides recR and htpG are separated by 109 nucleotides htpG and adk are separated by 180 nucleotides
b0471: ybaB - hypothetical protein (NCBI), at 493,300 to 493,629
ybaB
b0472: recR - recombination protein RecR (NCBI), at 493,629 to 494,234
recR
b0473: htpG - heat shock protein 90 (NCBI), at 494,344 to 496,218
htpG
b0474: adk - adenylate kinase (NCBI), at 496,399 to 497,043
adk
Position (kb) 494
495
496
497 Strain fitness (log2 ratio) -2
-1
0
1
2 at 493.392 kb on + strand, within ybaB at 493.488 kb on - strand, within ybaB at 493.499 kb on - strand, within ybaB at 493.499 kb on - strand, within ybaB at 493.517 kb on + strand, within ybaB at 493.713 kb on - strand, within recR at 493.724 kb on + strand, within recR at 493.879 kb on + strand, within recR at 493.882 kb on - strand, within recR at 493.887 kb on - strand, within recR at 493.887 kb on - strand, within recR at 493.949 kb on + strand, within recR at 493.993 kb on + strand, within recR at 494.016 kb on - strand, within recR at 494.016 kb on - strand, within recR at 494.016 kb on - strand, within recR at 494.018 kb on + strand, within recR at 494.057 kb on + strand, within recR at 494.074 kb on + strand, within recR at 494.094 kb on - strand, within recR at 494.099 kb on - strand, within recR at 494.115 kb on + strand, within recR at 494.211 kb on - strand at 494.211 kb on - strand at 494.211 kb on - strand at 494.291 kb on - strand at 494.345 kb on - strand at 494.345 kb on - strand at 494.448 kb on + strand at 494.517 kb on - strand at 494.561 kb on + strand, within htpG at 494.596 kb on - strand, within htpG at 494.619 kb on - strand, within htpG at 494.630 kb on - strand, within htpG at 494.658 kb on + strand, within htpG at 494.758 kb on + strand, within htpG at 494.821 kb on + strand, within htpG at 494.871 kb on - strand, within htpG at 494.871 kb on - strand, within htpG at 495.048 kb on - strand, within htpG at 495.108 kb on + strand, within htpG at 495.133 kb on + strand, within htpG at 495.155 kb on + strand, within htpG at 495.160 kb on + strand, within htpG at 495.164 kb on + strand, within htpG at 495.174 kb on + strand, within htpG at 495.205 kb on + strand, within htpG at 495.249 kb on + strand, within htpG at 495.255 kb on + strand, within htpG at 495.267 kb on - strand, within htpG at 495.267 kb on - strand, within htpG at 495.269 kb on + strand, within htpG at 495.269 kb on + strand, within htpG at 495.277 kb on - strand, within htpG at 495.277 kb on - strand, within htpG at 495.292 kb on + strand, within htpG at 495.377 kb on + strand, within htpG at 495.377 kb on + strand, within htpG at 495.497 kb on - strand, within htpG at 495.526 kb on - strand, within htpG at 495.622 kb on - strand, within htpG at 495.643 kb on + strand, within htpG at 495.643 kb on + strand, within htpG at 495.651 kb on - strand, within htpG at 495.653 kb on + strand, within htpG at 495.661 kb on + strand, within htpG at 495.661 kb on + strand, within htpG at 495.763 kb on - strand, within htpG at 495.783 kb on - strand, within htpG at 495.968 kb on + strand, within htpG at 496.118 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Aluminum chloride 5 mM remove 493,392 + ybaB b0471 0.28 -0.2 493,488 - ybaB b0471 0.57 -1.3 493,499 - ybaB b0471 0.60 +1.4 493,499 - ybaB b0471 0.60 -0.8 493,517 + ybaB b0471 0.66 +1.1 493,713 - recR b0472 0.14 +1.0 493,724 + recR b0472 0.16 -0.6 493,879 + recR b0472 0.41 +0.4 493,882 - recR b0472 0.42 -0.1 493,887 - recR b0472 0.43 -0.8 493,887 - recR b0472 0.43 -1.0 493,949 + recR b0472 0.53 +0.3 493,993 + recR b0472 0.60 -1.5 494,016 - recR b0472 0.64 -1.9 494,016 - recR b0472 0.64 -2.5 494,016 - recR b0472 0.64 +1.5 494,018 + recR b0472 0.64 -2.0 494,057 + recR b0472 0.71 +0.5 494,074 + recR b0472 0.73 +1.1 494,094 - recR b0472 0.77 +0.8 494,099 - recR b0472 0.78 -0.7 494,115 + recR b0472 0.80 -1.5 494,211 - -1.3 494,211 - +0.0 494,211 - +1.0 494,291 - +0.2 494,345 - -1.5 494,345 - +2.6 494,448 + +1.3 494,517 - +0.8 494,561 + htpG b0473 0.12 -0.8 494,596 - htpG b0473 0.13 +1.6 494,619 - htpG b0473 0.15 +1.4 494,630 - htpG b0473 0.15 +0.3 494,658 + htpG b0473 0.17 +0.9 494,758 + htpG b0473 0.22 +0.5 494,821 + htpG b0473 0.25 +1.1 494,871 - htpG b0473 0.28 +2.0 494,871 - htpG b0473 0.28 +1.5 495,048 - htpG b0473 0.38 +1.6 495,108 + htpG b0473 0.41 +2.3 495,133 + htpG b0473 0.42 +0.8 495,155 + htpG b0473 0.43 +2.4 495,160 + htpG b0473 0.44 +1.6 495,164 + htpG b0473 0.44 +1.2 495,174 + htpG b0473 0.44 +0.9 495,205 + htpG b0473 0.46 -2.3 495,249 + htpG b0473 0.48 +0.8 495,255 + htpG b0473 0.49 +0.6 495,267 - htpG b0473 0.49 +1.0 495,267 - htpG b0473 0.49 +2.6 495,269 + htpG b0473 0.49 +0.0 495,269 + htpG b0473 0.49 -0.2 495,277 - htpG b0473 0.50 +2.3 495,277 - htpG b0473 0.50 +1.6 495,292 + htpG b0473 0.51 +0.4 495,377 + htpG b0473 0.55 +2.3 495,377 + htpG b0473 0.55 -0.5 495,497 - htpG b0473 0.61 -0.1 495,526 - htpG b0473 0.63 +1.6 495,622 - htpG b0473 0.68 +1.0 495,643 + htpG b0473 0.69 +1.3 495,643 + htpG b0473 0.69 +2.0 495,651 - htpG b0473 0.70 +0.6 495,653 + htpG b0473 0.70 -0.4 495,661 + htpG b0473 0.70 +0.8 495,661 + htpG b0473 0.70 +0.6 495,763 - htpG b0473 0.76 +2.4 495,783 - htpG b0473 0.77 -1.8 495,968 + htpG b0473 0.87 +1.1 496,118 + +1.5
Or see this region's nucleotide sequence