Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS27765 and ABID97_RS27770 overlap by 20 nucleotides ABID97_RS27770 and ABID97_RS27775 are separated by 146 nucleotides ABID97_RS27775 and ABID97_RS27780 overlap by 4 nucleotides
ABID97_RS27765: ABID97_RS27765 - LuxR C-terminal-related transcriptional regulator, at 471,987 to 472,757
_RS27765
ABID97_RS27770: ABID97_RS27770 - glutathione S-transferase family protein, at 472,738 to 473,415
_RS27770
ABID97_RS27775: ABID97_RS27775 - efflux RND transporter permease subunit, at 473,562 to 476,639
_RS27775
ABID97_RS27780: ABID97_RS27780 - efflux RND transporter periplasmic adaptor subunit, at 476,636 to 477,751
_RS27780
Position (kb) 473
474
475
476
477 Strain fitness (log2 ratio) -2
-1
0
1
2 at 472.968 kb on - strand, within ABID97_RS27770 at 473.142 kb on - strand, within ABID97_RS27770 at 473.208 kb on - strand, within ABID97_RS27770 at 473.291 kb on + strand, within ABID97_RS27770 at 473.677 kb on + strand at 473.678 kb on - strand at 474.629 kb on - strand, within ABID97_RS27775 at 474.818 kb on - strand, within ABID97_RS27775 at 475.102 kb on + strand, within ABID97_RS27775 at 475.177 kb on + strand, within ABID97_RS27775 at 476.068 kb on + strand, within ABID97_RS27775 at 476.300 kb on - strand, within ABID97_RS27775 at 476.377 kb on + strand at 476.377 kb on + strand at 476.377 kb on + strand at 476.395 kb on + strand at 476.396 kb on - strand at 476.979 kb on + strand, within ABID97_RS27780 at 477.337 kb on - strand, within ABID97_RS27780
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 472,968 - ABID97_RS27770 0.34 -1.8 473,142 - ABID97_RS27770 0.60 -0.9 473,208 - ABID97_RS27770 0.69 -0.3 473,291 + ABID97_RS27770 0.82 -0.4 473,677 + -0.3 473,678 - -0.2 474,629 - ABID97_RS27775 0.35 -0.1 474,818 - ABID97_RS27775 0.41 -0.5 475,102 + ABID97_RS27775 0.50 -0.3 475,177 + ABID97_RS27775 0.52 -0.3 476,068 + ABID97_RS27775 0.81 -1.5 476,300 - ABID97_RS27775 0.89 -0.5 476,377 + -0.4 476,377 + +0.0 476,377 + +0.4 476,395 + +0.1 476,396 - -0.4 476,979 + ABID97_RS27780 0.31 -1.6 477,337 - ABID97_RS27780 0.63 +1.9
Or see this region's nucleotide sequence