Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS27050 and ABID97_RS27055 are separated by 30 nucleotides ABID97_RS27055 and ABID97_RS27060 overlap by 41 nucleotides ABID97_RS27060 and ABID97_RS27065 are separated by 21 nucleotides
ABID97_RS27050: ABID97_RS27050 - AraC family transcriptional regulator ligand-binding domain-containing protein, at 329,062 to 330,114
_RS27050
ABID97_RS27055: ABID97_RS27055 - MFS transporter, at 330,145 to 331,395
_RS27055
ABID97_RS27060: ABID97_RS27060 - hypothetical protein, at 331,355 to 331,969
_RS27060
ABID97_RS27065: ABID97_RS27065 - thioredoxin family protein, at 331,991 to 332,797
_RS27065
Position (kb) 330
331
332 Strain fitness (log2 ratio) -1
0
1 at 330.094 kb on + strand at 330.934 kb on + strand, within ABID97_RS27055 at 331.088 kb on - strand, within ABID97_RS27055 at 331.274 kb on - strand at 331.285 kb on + strand at 331.285 kb on + strand at 332.185 kb on - strand, within ABID97_RS27065 at 332.193 kb on + strand, within ABID97_RS27065 at 332.278 kb on - strand, within ABID97_RS27065 at 332.284 kb on - strand, within ABID97_RS27065 at 332.344 kb on - strand, within ABID97_RS27065
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 330,094 + +1.0 330,934 + ABID97_RS27055 0.63 -0.2 331,088 - ABID97_RS27055 0.75 -1.7 331,274 - -0.3 331,285 + +0.5 331,285 + +0.0 332,185 - ABID97_RS27065 0.24 -0.3 332,193 + ABID97_RS27065 0.25 -0.1 332,278 - ABID97_RS27065 0.36 +0.1 332,284 - ABID97_RS27065 0.36 -0.4 332,344 - ABID97_RS27065 0.44 -0.7
Or see this region's nucleotide sequence