Experiment: L-Fucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABID97_RS03110 and ABID97_RS03115 are separated by 128 nucleotides ABID97_RS03115 and ABID97_RS03120 are separated by 35 nucleotides
ABID97_RS03110: ABID97_RS03110 - helix-turn-helix transcriptional regulator, at 630,016 to 630,960
_RS03110
ABID97_RS03115: ABID97_RS03115 - 2,3-epoxybenzoyl-CoA dihydrolase, at 631,089 to 632,765
_RS03115
ABID97_RS03120: ABID97_RS03120 - benzoyl-CoA 2,3-epoxidase subunit BoxB, at 632,801 to 634,228
_RS03120
Position (kb) 631
632
633 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 630.221 kb on - strand, within ABID97_RS03110 at 630.643 kb on + strand, within ABID97_RS03110 at 630.643 kb on + strand, within ABID97_RS03110 at 630.644 kb on - strand, within ABID97_RS03110 at 630.644 kb on - strand, within ABID97_RS03110 at 630.644 kb on - strand, within ABID97_RS03110 at 630.856 kb on + strand, within ABID97_RS03110 at 630.856 kb on + strand, within ABID97_RS03110 at 630.856 kb on + strand, within ABID97_RS03110 at 630.856 kb on + strand, within ABID97_RS03110 at 630.856 kb on + strand, within ABID97_RS03110 at 630.856 kb on + strand, within ABID97_RS03110 at 630.857 kb on - strand, within ABID97_RS03110 at 631.131 kb on + strand at 631.152 kb on + strand at 631.152 kb on + strand at 631.152 kb on + strand at 631.152 kb on + strand at 631.152 kb on + strand at 631.153 kb on - strand at 631.153 kb on - strand at 631.153 kb on - strand at 631.153 kb on - strand at 631.153 kb on - strand at 631.236 kb on + strand at 631.257 kb on + strand, within ABID97_RS03115 at 631.258 kb on - strand, within ABID97_RS03115 at 631.258 kb on - strand, within ABID97_RS03115 at 631.615 kb on + strand, within ABID97_RS03115 at 631.888 kb on - strand, within ABID97_RS03115 at 632.301 kb on + strand, within ABID97_RS03115 at 632.301 kb on + strand, within ABID97_RS03115 at 632.301 kb on + strand, within ABID97_RS03115 at 632.302 kb on - strand, within ABID97_RS03115 at 632.302 kb on - strand, within ABID97_RS03115 at 632.302 kb on - strand, within ABID97_RS03115 at 632.415 kb on + strand, within ABID97_RS03115 at 632.817 kb on - strand at 632.951 kb on + strand, within ABID97_RS03120 at 632.952 kb on - strand, within ABID97_RS03120 at 632.952 kb on - strand, within ABID97_RS03120 at 633.178 kb on - strand, within ABID97_RS03120 at 633.178 kb on - strand, within ABID97_RS03120 at 633.218 kb on + strand, within ABID97_RS03120 at 633.218 kb on + strand, within ABID97_RS03120 at 633.218 kb on + strand, within ABID97_RS03120 at 633.218 kb on + strand, within ABID97_RS03120 at 633.219 kb on - strand, within ABID97_RS03120 at 633.219 kb on - strand, within ABID97_RS03120 at 633.219 kb on - strand, within ABID97_RS03120 at 633.219 kb on - strand, within ABID97_RS03120 at 633.281 kb on + strand, within ABID97_RS03120 at 633.281 kb on + strand, within ABID97_RS03120 at 633.282 kb on - strand, within ABID97_RS03120 at 633.282 kb on - strand, within ABID97_RS03120 at 633.282 kb on - strand, within ABID97_RS03120 at 633.428 kb on + strand, within ABID97_RS03120 at 633.429 kb on - strand, within ABID97_RS03120 at 633.680 kb on + strand, within ABID97_RS03120 at 633.680 kb on + strand, within ABID97_RS03120 at 633.680 kb on + strand, within ABID97_RS03120 at 633.680 kb on + strand, within ABID97_RS03120 at 633.737 kb on + strand, within ABID97_RS03120 at 633.737 kb on + strand, within ABID97_RS03120 at 633.737 kb on + strand, within ABID97_RS03120
Per-strain Table
Position Strand Gene LocusTag Fraction L-Fucose (C) remove 630,221 - ABID97_RS03110 0.22 -2.5 630,643 + ABID97_RS03110 0.66 -0.9 630,643 + ABID97_RS03110 0.66 -1.8 630,644 - ABID97_RS03110 0.66 -1.2 630,644 - ABID97_RS03110 0.66 -0.1 630,644 - ABID97_RS03110 0.66 +0.8 630,856 + ABID97_RS03110 0.89 -0.4 630,856 + ABID97_RS03110 0.89 -0.8 630,856 + ABID97_RS03110 0.89 -1.2 630,856 + ABID97_RS03110 0.89 -2.7 630,856 + ABID97_RS03110 0.89 -2.7 630,856 + ABID97_RS03110 0.89 +0.1 630,857 - ABID97_RS03110 0.89 -0.9 631,131 + -0.3 631,152 + -1.5 631,152 + -0.8 631,152 + -1.0 631,152 + +0.8 631,152 + +0.1 631,153 - +3.3 631,153 - -0.8 631,153 - -0.4 631,153 - -1.4 631,153 - +0.3 631,236 + -0.9 631,257 + ABID97_RS03115 0.10 +0.9 631,258 - ABID97_RS03115 0.10 -0.8 631,258 - ABID97_RS03115 0.10 -0.8 631,615 + ABID97_RS03115 0.31 -1.0 631,888 - ABID97_RS03115 0.48 +0.2 632,301 + ABID97_RS03115 0.72 -2.0 632,301 + ABID97_RS03115 0.72 -1.3 632,301 + ABID97_RS03115 0.72 -1.9 632,302 - ABID97_RS03115 0.72 -0.5 632,302 - ABID97_RS03115 0.72 -0.0 632,302 - ABID97_RS03115 0.72 -1.1 632,415 + ABID97_RS03115 0.79 -1.8 632,817 - -0.4 632,951 + ABID97_RS03120 0.11 +0.0 632,952 - ABID97_RS03120 0.11 +1.3 632,952 - ABID97_RS03120 0.11 -0.2 633,178 - ABID97_RS03120 0.26 -0.1 633,178 - ABID97_RS03120 0.26 +0.3 633,218 + ABID97_RS03120 0.29 +0.2 633,218 + ABID97_RS03120 0.29 -0.3 633,218 + ABID97_RS03120 0.29 -0.1 633,218 + ABID97_RS03120 0.29 -0.4 633,219 - ABID97_RS03120 0.29 -0.3 633,219 - ABID97_RS03120 0.29 -1.1 633,219 - ABID97_RS03120 0.29 -0.7 633,219 - ABID97_RS03120 0.29 -0.1 633,281 + ABID97_RS03120 0.34 -0.2 633,281 + ABID97_RS03120 0.34 +0.4 633,282 - ABID97_RS03120 0.34 +0.6 633,282 - ABID97_RS03120 0.34 -1.1 633,282 - ABID97_RS03120 0.34 -0.2 633,428 + ABID97_RS03120 0.44 -0.5 633,429 - ABID97_RS03120 0.44 -0.3 633,680 + ABID97_RS03120 0.62 -0.2 633,680 + ABID97_RS03120 0.62 -1.3 633,680 + ABID97_RS03120 0.62 -0.7 633,680 + ABID97_RS03120 0.62 +0.3 633,737 + ABID97_RS03120 0.66 -0.2 633,737 + ABID97_RS03120 0.66 -0.2 633,737 + ABID97_RS03120 0.66 -0.5
Or see this region's nucleotide sequence