Strain Fitness in Escherichia coli BW25113 around b4185

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
4,409,425	-	yjfK	b4183	0.15	+1.2
4,409,425	-	yjfK	b4183	0.15	+0.3
4,409,459	-	yjfK	b4183	0.20	-0.8
4,409,498	+	yjfK	b4183	0.26	+1.0
4,409,521	-	yjfK	b4183	0.30	+0.4
4,409,537	+	yjfK	b4183	0.32	-0.0
4,409,537	+	yjfK	b4183	0.32	+0.1
4,409,551	-	yjfK	b4183	0.34	-0.8
4,409,617	-	yjfK	b4183	0.44	-0.5
4,409,635	+	yjfK	b4183	0.47	+0.7
4,409,641	-	yjfK	b4183	0.48	+1.5
4,409,656	-	yjfK	b4183	0.50	+0.1
4,409,662	+	yjfK	b4183	0.51	+3.2
4,409,662	+	yjfK	b4183	0.51	-1.5
4,409,668	-	yjfK	b4183	0.52	-1.8
4,409,670	-	yjfK	b4183	0.52	+0.7
4,409,689	+	yjfK	b4183	0.55	-1.6
4,409,689	+	yjfK	b4183	0.55	+1.2
4,409,693	+	yjfK	b4183	0.56	+2.1
4,409,699	-	yjfK	b4183	0.57	+1.0
4,409,700	+	yjfK	b4183	0.57	+2.1
4,409,700	+	yjfK	b4183	0.57	+2.1
4,409,708	-	yjfK	b4183	0.58	+1.2
4,409,708	-	yjfK	b4183	0.58	-1.5
4,409,717	+	yjfK	b4183	0.59	+0.5
4,409,750	+	yjfK	b4183	0.64	+0.2
4,409,758	+	yjfK	b4183	0.66	-1.9
4,409,768	+	yjfK	b4183	0.67	-1.3
4,409,768	+	yjfK	b4183	0.67	+1.7
4,409,769	+	yjfK	b4183	0.67	-1.9
4,409,814	-	yjfK	b4183	0.74	-0.8
4,409,834	+	yjfK	b4183	0.77	+1.4
4,409,835	+	yjfK	b4183	0.77	-0.5
4,409,835	+	yjfK	b4183	0.77	-0.0
4,409,835	+	yjfK	b4183	0.77	-1.8
4,409,835	+	yjfK	b4183	0.77	-1.3
4,409,835	+	yjfK	b4183	0.77	-1.6
4,409,846	+	yjfK	b4183	0.79	+0.1
4,409,914	+	yjfK	b4183	0.89	+1.8
4,409,936	+				+1.3
4,409,936	+				-1.2
4,409,947	+				+0.2
4,409,947	+				-0.0
4,409,957	+				-0.6
4,409,999	+				-1.9
4,409,999	+				-2.9
4,410,164	-	yjfL	b4184	0.41	-0.8
4,410,164	-	yjfL	b4184	0.41	-0.5
4,410,167	-	yjfL	b4184	0.41	-0.5
4,410,167	-	yjfL	b4184	0.41	-0.0
4,410,177	-	yjfL	b4184	0.44	+1.2
4,410,177	-	yjfL	b4184	0.44	-2.1
4,410,182	+	yjfL	b4184	0.45	-0.8
4,410,182	+	yjfL	b4184	0.45	-0.0
4,410,184	-	yjfL	b4184	0.46	+0.7
4,410,189	+	yjfL	b4184	0.47	+0.5
4,410,190	-	yjfL	b4184	0.47	-1.0
4,410,190	-	yjfL	b4184	0.47	-1.2
4,410,190	-	yjfL	b4184	0.47	-2.6
4,410,190	-	yjfL	b4184	0.47	-0.0
4,410,190	-	yjfL	b4184	0.47	+1.5
4,410,195	-	yjfL	b4184	0.48	-1.0
4,410,206	-	yjfL	b4184	0.51	-0.9
4,410,207	-	yjfL	b4184	0.51	-0.3
4,410,215	+	yjfL	b4184	0.53	+1.4
4,410,221	-	yjfL	b4184	0.55	-2.9
4,410,228	-	yjfL	b4184	0.57	-0.0
4,410,228	-	yjfL	b4184	0.57	-0.6
4,410,248	+	yjfL	b4184	0.62	+2.5
4,410,256	-	yjfL	b4184	0.64	-3.0
4,410,282	+	yjfL	b4184	0.70	-1.9
4,410,294	-	yjfL	b4184	0.73	-1.3
4,410,379	-				+0.1
4,410,385	+				-1.9
4,410,392	+				+0.8
4,410,393	-				+1.7
4,410,393	-				+0.1
4,410,395	-				-0.5
4,410,400	-				+0.5
4,410,400	-				+1.5
4,410,404	-				-3.4
4,410,405	-				-2.6
4,410,405	-				+1.2
4,410,405	-				+1.3
4,410,407	+				-0.5
4,410,407	+				-0.2
4,410,407	+				+1.5
4,410,447	-				-2.4
4,410,471	+				+0.7
4,410,477	-	yjfM	b4185	0.10	+1.2
4,410,477	-	yjfM	b4185	0.10	-0.8
4,410,479	-	yjfM	b4185	0.11	-2.0
4,410,489	-	yjfM	b4185	0.12	+0.5
4,410,497	-	yjfM	b4185	0.14	+0.1
4,410,515	-	yjfM	b4185	0.16	-1.8
4,410,515	-	yjfM	b4185	0.16	-1.6
4,410,539	+	yjfM	b4185	0.20	+2.1
4,410,547	-	yjfM	b4185	0.21	+1.1
4,410,547	-	yjfM	b4185	0.21	-1.2
4,410,549	-	yjfM	b4185	0.22	-0.8
4,410,575	+	yjfM	b4185	0.26	+0.0
4,410,579	-	yjfM	b4185	0.26	+1.1
4,410,590	-	yjfM	b4185	0.28	-1.2
4,410,591	-	yjfM	b4185	0.28	+0.1
4,410,632	-	yjfM	b4185	0.35	-0.7
4,410,637	-	yjfM	b4185	0.36	+0.7
4,410,637	-	yjfM	b4185	0.36	+3.2
4,410,637	-	yjfM	b4185	0.36	-1.1
4,410,637	-	yjfM	b4185	0.36	-1.8
4,410,642	-	yjfM	b4185	0.36	+1.2
4,410,647	-	yjfM	b4185	0.37	-1.3
4,410,647	-	yjfM	b4185	0.37	+2.5
4,410,647	-	yjfM	b4185	0.37	+0.2
4,410,647	-	yjfM	b4185	0.37	-0.8
4,410,659	-	yjfM	b4185	0.39	+0.5
4,410,685	-	yjfM	b4185	0.43	+0.4
4,410,685	-	yjfM	b4185	0.43	-0.5
4,410,691	-	yjfM	b4185	0.44	-1.4
4,410,731	+	yjfM	b4185	0.50	-1.1
4,410,731	+	yjfM	b4185	0.50	+2.2
4,410,745	+	yjfM	b4185	0.52	-0.1
4,410,745	+	yjfM	b4185	0.52	+0.3
4,410,753	-	yjfM	b4185	0.54	+2.9
4,410,784	-	yjfM	b4185	0.59	-1.9
4,410,792	-	yjfM	b4185	0.60	+1.2
4,410,854	+	yjfM	b4185	0.69	+0.7
4,410,862	-	yjfM	b4185	0.71	-2.1
4,410,862	-	yjfM	b4185	0.71	+1.5
4,410,876	+	yjfM	b4185	0.73	+1.4
4,410,891	-	yjfM	b4185	0.75	-1.3
4,410,893	+	yjfM	b4185	0.76	+2.9
4,410,906	+	yjfM	b4185	0.78	-1.5
4,410,906	+	yjfM	b4185	0.78	+0.5
4,410,955	+	yjfM	b4185	0.85	+0.3
4,411,147	+				+2.5
4,411,260	-	yjfC	b4186	0.18	+0.8
4,411,298	+	yjfC	b4186	0.21	+0.2
4,411,298	+	yjfC	b4186	0.21	+1.5
4,411,357	+	yjfC	b4186	0.26	-1.3
4,411,376	-	yjfC	b4186	0.28	+0.2
4,411,398	+	yjfC	b4186	0.30	-1.6
4,411,398	+	yjfC	b4186	0.30	-1.9
4,411,579	+	yjfC	b4186	0.45	-2.2
4,411,585	-	yjfC	b4186	0.46	+0.4
4,411,642	+	yjfC	b4186	0.51	-0.6
4,411,643	-	yjfC	b4186	0.51	-2.9
4,411,704	-	yjfC	b4186	0.56	-1.6
4,411,704	-	yjfC	b4186	0.56	-0.8
4,411,730	-	yjfC	b4186	0.58	+4.0
4,411,740	+	yjfC	b4186	0.59	-1.0
4,411,805	+	yjfC	b4186	0.65	-1.3
4,411,863	-	yjfC	b4186	0.70	+0.5
4,411,863	-	yjfC	b4186	0.70	+1.4
4,411,872	+	yjfC	b4186	0.71	-1.9
4,411,900	-	yjfC	b4186	0.73	+0.5
4,411,900	-	yjfC	b4186	0.73	-0.8
4,411,904	+	yjfC	b4186	0.73	-1.6
4,411,904	+	yjfC	b4186	0.73	-0.5
4,411,958	-	yjfC	b4186	0.78	-0.0
4,412,034	-	yjfC	b4186	0.84	-1.8