Strain Fitness in Escherichia coli BW25113 around b3729
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,908,891 | - | pstS | b3728 | 0.37 | -1.3 |
3,908,919 | - | pstS | b3728 | 0.39 | -2.5 |
3,908,973 | + | pstS | b3728 | 0.45 | -0.1 |
3,908,997 | - | pstS | b3728 | 0.47 | -2.0 |
3,909,029 | + | pstS | b3728 | 0.50 | -0.4 |
3,909,095 | - | pstS | b3728 | 0.56 | -0.1 |
3,909,155 | + | pstS | b3728 | 0.62 | -1.1 |
3,909,161 | + | pstS | b3728 | 0.63 | -0.1 |
3,909,231 | - | pstS | b3728 | 0.69 | -0.9 |
3,909,231 | - | pstS | b3728 | 0.69 | -0.8 |
3,909,439 | - | pstS | b3728 | 0.89 | +0.3 |
3,909,445 | - | -1.9 | |||
3,909,480 | + | +0.3 | |||
3,909,480 | + | -1.1 | |||
3,909,504 | - | +0.9 | |||
3,909,537 | - | -0.3 | |||
3,909,553 | - | -0.1 | |||
3,909,562 | - | +0.3 | |||
3,909,566 | + | -2.1 | |||
3,909,566 | + | -2.8 | |||
3,909,608 | - | -2.3 | |||
3,909,621 | + | -1.7 | |||
3,909,763 | - | +1.9 | |||
3,909,791 | + | -0.4 | |||
3,909,847 | - | -1.1 | |||
3,909,847 | - | +0.7 | |||
3,909,857 | - | +0.8 | |||
3,911,718 | + | +1.6 | |||
3,911,759 | + | -0.1 | |||
3,911,768 | - | +1.8 | |||
3,911,804 | + | +0.5 | |||
3,911,813 | - | +0.3 | |||
3,911,813 | - | +1.1 |
Or see this region's nucleotide sequence